Salvelinus namaycush (lake trout): 120059217
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Entry
120059217 CDS
T07522
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120059217 (apex2)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120059217 (apex2)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120059217 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
120059217
NCBI-ProteinID:
XP_038864020
UniProt:
A0A8U1C9G0
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Position
Sna14:18216282..18220624
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AA seq
592 aa
AA seq
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MKIVSWNINGIRTFKGGIKKALESLDADIVCVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTTNHEGTIGCYGDLREFSSEELQLLDNEGRA
VLTQHRVMCEDTPETVTVINVYCPRADPEKPERKNFKLQFYKLLQCRAEAILEAGSRVII
LGDVNTSHRPIDHCDPDYIDDFDDHPGRKWLNGLLVDDSEGKEYGKNDEEESENTSSKPL
SSGKFVDTFRHFHPTRSKAFTCWNTMTGARQTNYGTRIDYIFADHPLVKMGFVAADIMPE
VEGSDHCPVWGKLCCPLLSSSKLPPFCTRNLPEFAGRQQKLSRFLVKMDQQQPAREACRD
PLSGSQETGETRENLNPLGSAGTSSTGKKRKLAVESGVPKSKKIMTLKAATPKPQGNLLA
FFKPKSMPVAPTREDPVSQCERGEERNEVTPSQPHTFKGGHSAGQDVPSIPGTRTEDPQG
VCMGDNVHEPGSNIQGVNNQNQGKDAALASEATVDPPCLRKGASLGGFWKTVLRGPPPPP
PCKSHGEPCVLRTVKKAGPNMGKQFFVCNRPQGHASNPEARCNFFSWVDKGK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcagttggaacattaatggcataaggactttcaagggcggaattaaaaag
gcgcttgagtcgctggatgctgacatcgtatgtgtacaagagacaaaagtaacaagagac
ctgttggatgagaggactgctattgttgaaggttataactcctatttcagctttagtcgt
ggacgcagtggctactcaggagttgctacttactgcaaagacagtgccaccccatttgct
gcagaggagggcttgaccggtttgctgaccaccaaccacgaggggaccattggatgctat
ggtgacctgagagagttctccagtgaggagctgcagctcctggacaacgagggaagggct
gttctcacacagcacagggtcatgtgtgaagacacacctgaaacagttacggttatcaat
gtatactgcccacgagctgacccagaaaagcctgaacgtaaaaatttcaaactgcagttc
tacaagctgcttcaatgtcgggctgaagcaattttggaagctgggagccgtgtaatcatc
ttgggagatgtgaatacatcccaccggcccatagatcactgtgacccagattacatagat
gattttgatgatcaccccggcaggaaatggctaaacggtttactggttgatgacagtgaa
ggaaaggagtatggaaaaaacgatgaggaagagtctgagaatacctcatcaaaacccctc
agcagcggcaagtttgtggacaccttccgccattttcacccaacacgctccaaggccttc
acctgttggaacactatgactggagccaggcagaccaactatggcacacgtatcgactac
atcttcgcagaccatcccttggttaaaatggggtttgtggcagcagacatcatgccagag
gtggaggggtctgatcactgccctgtctgggggaaactgtgctgccccctcctgtccagc
tccaagctgcctcccttctgtacccgcaacctaccagagttcgctggcaggcagcagaaa
ctctcacgcttcctcgtcaagatggaccaacaacaacctgccagagaggcctgcagggac
ccactatcaggatctcaggagactggggagacccgagagaacctgaatccactgggatca
gcagggaccagctccactggaaagaaacggaagttggcagtggaatctggtgtcccaaag
agcaaaaagattatgacactgaaggctgctaccccaaagccccagggcaacctcctagcc
tttttcaagcccaaatccatgcctgtggccccaaccagggaagaccctgtgagtcagtgt
gagaggggagaagagagaaatgaagtgaccccatcacaaccacataccttcaagggagga
cattctgcaggacaagatgtcccttcaattccaggcacgcgcacagaagatccccagggt
gtctgtatgggagacaatgtccatgaaccgggcagcaacatacagggtgtcaataatcaa
aaccaggggaaggatgcagccctggcttcagaggctactgtagaccccccatgtctcagg
aagggggcttcactgggtgggttctggaagacggtcctgcgtgggccacccccaccgccc
ccctgtaagtctcatggggaaccctgtgtactccgcacagtcaagaaggcaggtccaaac
atgggcaagcagttctttgtgtgtaaccgccctcagggtcatgcatccaatcctgaggct
cgctgtaacttcttttcctgggtggataaaggaaaatag
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