KEGG   Salvelinus namaycush (lake trout): 120059241
Entry
120059241         CDS       T07522                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:snh01009]
    120059241
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120059241
Enzymes [BR:snh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     120059241
Protein phosphatases and associated proteins [BR:snh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120059241
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120059241
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHD-1st_NSD
Other DBs
NCBI-GeneID: 120059241
NCBI-ProteinID: XP_038864062
UniProt: A0A8U1C1Y5
LinkDB
Position
Sna14:complement(19267935..19305866)
AA seq 1543 aa
MTQPRPDEFKPPPECPVFEPSWEEFADPFAFINKIRPIAEKTGICKVRPPPGWQPPFACN
VDRLHFTPRIQRLNELEAQTRVKLNFLDKIAKFWELQGCSLKIPHVERKILDLYQLNKNV
ADEGGFDIVCRNRRWTAIALKMGFAPGKAVGSHLRSHYERILYPYNLFQSGANLLAPELA
SKLMRLVSAPELDTFVQKPTLPLDTSDKEYKPHDLAERQQFVQPAESCCNSARRAKRMRA
EVDALVEQSLTHLSEELLINPSGCVKIEPGTKPCENRPNLRRRMGSFVAKPEPEKEIPIL
VKQEPIEPVSEADENKSRYKKKPSLDVPPPAVNVVDLYICLVCGSGSDEDRLLLCDGCDD
SYHTFCLIPPLNDVPKGDWRCPKCLAQECSKPQEAFGFEQAYRDYSLRAFGEMADSFKSD
YFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPIRNGRFKVSEKDE
MYLKCGWNLNNMAMMDPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLH
WGEPKTWYGAPGFAAEQLEAVMKKLAPELFQIQPDLLHQLVTIMNPNTLMSHGVPIYRTN
QCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWMALGRQCVDHYRLLHRYCVFSHDEM
ICQMASKANSLDVVLASAVQKDMKDMIREEQDLRDKVRKMGVKHCEQAEYNLLQDDERQC
AKCRTTCYLSAITCPCSPGRLVCLHHIQDLCSCPLTNYTLNYRFTLDDLYPMMNAVKQRA
EFYDEWASHVTDTLEAKLDKKKSLSVFRSLINKSELKMFPDNDLLRQLRLVTQDAEKCSS
VAQQLLNGKRQTRYRCGGGKTQSQLTVEELRSFVRQLYNLPCSLPQAPKLKELLNCIEDF
QQHSEKLLADETTGTAEIQSLLDVSFDFDVELPELPLLRERLAQARWLEGVQQASTQRST
LTLETMRRLIDQGVGLTPHPSAEKAMARLQELLTVSEHWENKTSSLLKARPPLSIEALSE
TAEKVAGIPAYLPNCLMLKDSISRAREWLQEAEALQDEDSIPLFYNLSDMVIRGQDIPVQ
LGPLKQLESLVAEVQAWKESAAKTFLMKNSHFTLLEVLCPRCEVEAGSPKRKSKKAKDIT
QHSKKKMVKLDCLSDVEKALSETKDSASALATLGEVRLQEMGALSSLRAANESKLLPTAD
CMGLKVCVCQNPPMGAMLQCELCRDAFHSVCVRASSDSRSAQAWLCPHCRRSEKPSLDKV
LPLLASLQRIQVRLPEGDALHYLVERTVSWQQRARQVSSSCGLPDLEESFATPPSPDGKL
TCLTPEWNRTTHDQMVFYTEQRCIPLQDLSVELEELMVEGLLLQVSLPEITQLYHVLLNG
LRTHHTNERTSLQDDDPSDCDKLKQCNSQGKSFPQKDGLIKEGVNGAEKKAKRRLEREAV
EPERRDKAKKLQNKRQKMNKEKNLERKAASTSSSHSDFSQSDDSEEEMCPAEGCQQPEGD
EVDWVQCDGSCNQWFHQVCVGVTAELAEKEDYVCDNCTISDGR
NT seq 4632 nt   +upstreamnt  +downstreamnt
atgacccagcctcggccggacgagttcaagccacctccggagtgcccagtcttcgaacca
agctgggaggaatttgccgatccttttgcttttataaataagatccgtccaattgcggaa
aaaactggcatttgtaaggtccgcccgcctccgggctggcagccaccatttgcatgtaat
gttgacagactgcacttcactcctcggatacagaggctcaatgaactggaggcacagacc
agggtcaagcttaacttcttggacaagattgcaaagttctgggagttgcaggggtgttct
ctgaagattcctcatgtggaaaggaagatattggacctttatcaactcaacaagaatgtt
gcagatgagggtggatttgatattgtgtgtcgcaacagacgatggacggcgattgcactt
aagatgggctttgctcctggcaaggctgtgggctctcacctacggtcgcactatgagaga
atcctctacccctacaacctcttccagagtggagctaacctcctggcaccagagcttgct
tccaagctgatgcgtttagtgtctgcccctgaacttgacacgtttgtccagaagccaacc
ctgccacttgacacaagtgacaaggagtacaaaccccatgacctggccgagaggcagcag
tttgtccagccagccgagtcctgctgcaacagcgcccgcagagcaaagcggatgagagct
gaggtggatgctcttgtcgaacagagcctcacacacttgtcagaagaactcctcataaac
ccatccggttgtgtgaagatcgaaccaggaactaaaccctgtgagaacagaccaaatctg
aggaggaggatgggctcctttgttgccaagcccgagccagaaaaagaaattcccattcta
gtgaaacaggaacccattgagccggtgagcgaggcagatgaaaacaagtctcgatataag
aaaaaacccagtcttgatgtcccacctcctgcagtgaatgtagtggacctgtatatttgt
ctggtgtgtggcagcgggagtgacgaggatcgtcttctgttgtgtgatggctgtgacgac
agttaccacaccttctgtctcataccccctctaaacgacgtccccaaaggagactggagg
tgccccaagtgcctggctcaagagtgcagcaaacctcaggaggcatttggttttgagcag
gcatacagggactactctttgcgggcttttggtgaaatggcagactccttcaaatctgat
tacttcaacatgccagttcatatggttcccacagagttggtggaaaaagagttctggcgc
ttggtgagcaccatcgaggaggacgtcacagtggagtatggagcggatatagcctccaag
gagtttgggagcggattccccatcaggaatggaagatttaaggtttcagaaaaggatgag
atgtacctgaagtgtggctggaacctgaacaacatggcgatgatggacccgtcagtgttg
actcatgtcacagcagacatctgtgggatgactctaccttggctctatgtaggcatgtgc
ttttcctccttctgctggcacatcgaggaccactggagctactccatcaactacctgcac
tggggggagccgaagacgtggtatggagcacctggctttgctgcagaacagcttgaggct
gtgatgaagaaactggctccagagctgtttcagattcagcctgacctcctccaccagctg
gtcaccatcatgaaccccaacaccctcatgtctcacggggtccctatttatagaacaaat
cagtgtgctggtgagtttgtcatcaccttccccagagcttatcacagtggtttcaaccag
ggtttcaacttcgctgaagctgtaaacttctgcactgtggactggatggcattaggccgc
cagtgcgttgaccactacagactgctgcatcggtactgtgttttctcgcacgacgagatg
atctgccagatggcctccaaggccaacagtctggacgtggtcctggcgtcggctgtccag
aaagatatgaaggatatgatcagagaggagcaggacctacgagataaagtccgcaagatg
ggggtgaagcattgcgagcaggcggaatacaatctcctgcaggatgacgagcggcagtgt
gccaagtgtaggaccacatgttacctgtctgccatcacctgcccctgcagccctggccgg
ctggtctgtctccaccacatccaggacctctgctcctgccccctcaccaactacacactg
aattatagatttacactggatgatctgtaccccatgatgaacgcggtgaagcagcgagct
gagttctatgatgagtgggcctcccacgtgacagacactctggaggctaaactggacaag
aaaaaaagcttgtcagtcttccgctccctcatcaataaatcagagttgaagatgttccct
gacaacgacctcctgcgtcagctccgtttagtcacacaggatgcagagaaatgctcctca
gttgcccagcagctactcaacggcaaaaggcagaccaggtatcgctgtggtggagggaag
acacagagccagctgactgtggaggagctgaggtcatttgtcaggcaactgtacaacctc
ccatgcagccttccccaagcccccaaattaaaggagctcttgaattgcatcgaagacttc
cagcaacacagtgagaagctcctggcagacgagaccaccggcacagcagagatccagagt
cttctagacgttagctttgactttgacgtggagctgcctgaacttccattactacgggag
aggctggcacaagcccgctggctagagggggtgcagcaggccagcacccagcgctccacc
ctgaccctggagaccatgcggaggctgatagaccagggcgtgggtctgacccctcacccc
tctgcggagaaggccatggctcgcctgcaggagctgctaactgtgtctgaacactgggag
aacaagaccagcagcctcctcaaggccaggccccccctctctatagaagccctctccgaa
acagctgagaaggtggctggtatccctgcttacctccccaattgtctgatgctgaaggac
tccatcagtagggccagagagtggcttcaggaagctgaggcacttcaggatgaagattcc
attccattgttttacaacctctctgatatggttattcgaggacaagacatcccagtccag
cttggccctctaaagcagctggagtccctggtggcagaggtgcaggcctggaaagagtct
gcagctaaaactttcctcatgaaaaactctcacttcactctgcttgaggttctgtgtcca
agatgtgaagttgaagcaggttctccgaaaaggaagtccaaaaaagctaaagacatcact
cagcacagcaagaagaagatggtgaagcttgactgtctcagtgatgtggaaaaagccctc
tcagagaccaaggactctgcttctgctctggcaactctcggggaggtgcggttacaggag
atgggggccctctcctccctccgggcagctaacgagtccaagctccttcccacggcagac
tgcatgggcctgaaggtgtgtgtgtgtcagaatccccccatgggagccatgttacagtgt
gagctctgccgggacgccttccacagcgtgtgtgtgagggcttcctcagactcccgttca
gcccaggcctggctgtgcccgcactgccgacgctctgagaagccctccctggacaaggtc
ctgcccttgctggcatcgctgcagcgtatccaggtgcgtctgccggaaggcgatgcactt
cactatttggttgagagaacagtcagctggcaacagcgtgcgcgacaggtctcttcctcc
tgtggactaccagacctggaggagagctttgcaactccaccatctccggatggaaagcta
acatgtttaactccagagtggaacaggacaactcatgatcagatggtcttctacaccgag
caaagatgcattcctctgcaggatcttagtgtggagctggaggagttgatggtggaaggg
ctcctgctgcaggtgtctcttccagagatcacacagctataccatgtgttactgaacggg
ctgagaacgcatcataccaacgaacgcacatcactgcaagatgacgacccttcagactgt
gacaaactcaagcagtgcaactctcagggaaaaagctttccacaaaaggatgggttgata
aaggaaggagtgaacggagcagagaagaaggctaagcgacgcctggagagggaggctgta
gagccagagcgcagggacaaggccaagaagctccagaacaagagacagaaaatgaacaaa
gagaagaacctggaacgcaaggcggcgtcgacctcctcgtctcactccgacttctcccag
tcagatgactctgaagaggagatgtgtccagcagagggatgccagcaacctgaaggagat
gaggtcgactgggtccagtgtgatggcagctgtaaccagtggttccaccaagtctgtgtg
ggtgtgacagccgagctggctgagaaagaagactatgtgtgtgacaactgcacaataagc
gatggtcgctga

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