Salvelinus namaycush (lake trout): 120059281
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Entry
120059281 CDS
T07522
Name
(RefSeq) neural cell adhesion molecule L1-like protein
KO
K06758
L1 cell adhesion molecule like protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120059281
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
L1 family
120059281
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GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
120059281
NCBI-ProteinID:
XP_038864146
UniProt:
A0A8U1BZV9
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Position
Sna2:complement(13865282..13974285)
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AA seq
1169 aa
AA seq
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MRMRSSSWSPGLALLVGVVASICAFHPTTAIDIPLEVEQLPTITEASPSSLIAFPFDESF
PMTCEAKGNPKPEFWWTKNGEEFDPYQDPRLIKEKNSGTFVIPNTGNLTEYQGIYRCYAS
NKLGTAITEEIEFVVPHVPKFPKEKIDPIEVEEGQPVILECNPPKGIPPLQIYWMTIGLQ
HIEQDDRVSMGLNGDLFFSNALEKDSHRDYCCFAAFPKIRTIVQKNAMSVIVKSKNSNND
SSSGPGHANSIMERKPSLLMPSGVKSKTQLVKGDELLLECIAEGFPTPMIEWLKIDHRLP
DRVTIENHGKLLSIDQVDEDDNGKYMCKAMNIHGMAVHYFDVSVEEPPQWVSEPESQLSM
IGSDVLINCSATGTPQPTIQWMVNGKPIEEVPASNRKEFDDKIVLHKANSTDSAVYQCEA
SNRHGTLLANANIMIMNLPPMILTEEGLEYSAVEGKVIVMHCKVFSSPPSVVTWNKEDST
GSVEGPRFTVHQNGSLEIYNVEKEDMGQYTCYTKNTEGASAITALLDVKDPTKIFQAPED
LQVLIGTTAQLSCLAVYDNSFSGDFEIVWEKDDMEIALNHTENSGYFIEDGILQIVNVSH
RDQGMYKCVASTPMDQDTASALLMVLDIPHAPENLVLSEHKGRSVKLKWITGEDHNSSTT
EFIIEYEESQWEPGTWRELQRVPGNHGSAVLKLYGHVDYRFRVSGVNTVGRGRPSEPTER
YKTPPAAPDKNPENIKIEGHLPHEMDINWEPLSPIEHNGPGLEYKVSYKRQHVEEDWQEH
VVKRHSFVVKDTPTFVPYEIRIQARNHQGWGPEPKVVTGYSGEDFPSAAPDDAAVEVMNN
SLVKVSWTRVHKDKLHGHLGGYRINWWRLRSLLDSKKTHGDKHTLTFPGDRNHAMVPGLT
PFSEYSLIVMTFNRRGNGPGSHAVNFKTPEGVPEKNPVFRVTDVQKHTVTLTWAPPLEVN
GVLTGYLLEYQLINDTEEVGVLQTVDISNPDITTWVLQNLEAISRYKFYLRPCTRVGCGP
WVSKESTTTPEARLASIHGGISTQGWFIGLMCVVALLTLLVLIACFVNRNKGGKYSVKEK
EDLHPDLESQGIHDDTFCEYSDNDEKPLKGSQHSLSGQIKAEDSGDSLVDYGDEDIQFNE
DGSFIGEYAGRKEKKVSMEVKGTTNQSTA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaggtcgtcgagttggagcccaggattggctctcctggtgggtgtggtcgcc
agtatctgtgcctttcaccccaccactgccatagacataccactggaggttgagcagctg
cccaccatcacagaggcctcccccagctctctgatcgccttccccttcgatgagagcttc
cccatgacgtgtgaagccaaagggaaccccaagccagaattctggtggacgaagaatggg
gaagagtttgacccttaccaggacccaaggctgatcaaggagaaaaactcggggacgttt
gtgatccccaacactgggaacctcacagagtaccagggaatttaccgctgttatgcctcg
aataaactagggacagccataacagaggagattgagtttgttgtgccccatgtaccgaag
tttcctaaggagaagattgatcccatcgaggtggaggagggtcagcctgtcattctggag
tgtaaccctcctaaaggaatccctcctttacagatctattggatgaccatcggccttcag
cacatagagcaggatgacagggtgtccatgggtctgaacggcgacctgttcttctctaat
gctctggagaaggatagccacagagactactgctgcttcgctgccttccccaagatacgc
accatcgtacagaagaatgccatgtctgtcatagtcaagagcaaaaattcaaacaatgac
tcaagtagcggtccaggtcatgccaattcaatcatggagagaaaaccaagtcttctgatg
ccctctggtgtcaagtcgaagacacagctggtgaaaggtgacgagctactactggagtgc
attgcagagggctttccaactcccatgattgagtggttgaagatagaccacaggctgcct
gacagagtaacaatcgagaaccatgggaaactcctgagcattgaccaggttgatgaagac
gacaatgggaagtacatgtgtaaggctatgaacatccacggaatggccgtccactacttt
gacgtatcagtggaagagcctcctcagtgggtgtctgagcctgagagccagcttagtatg
attggctcagatgtgctcatcaattgctccgccacgggcacacctcagcccaccatccaa
tggatggtgaatggaaagcctattgaggaggtcccagcatctaacagaaaagagtttgat
gacaaaattgtcttgcacaaagccaactcgactgacagtgccgtctaccaatgtgaggcc
tccaacagacatggaaccctgctagccaatgccaatatcatgatcatgaatctgcctcct
atgatcctgacagaggaaggtctggagtattcagctgtggaggggaaggttatagtgatg
cactgcaaggtgttcagttctccaccctctgttgttacctggaacaaggaggactccaca
ggatctgtggagggaccaaggtttacagttcaccagaatggatcattggagatctataat
gtggaaaaagaagacatgggccaatacacatgttacaccaagaatactgaaggggcgtct
gctatcactgccctactggatgttaaagatcccacaaagatattccaggccccggaagac
ttgcaggtcctaataggaaccacagcccagctctcctgcctggcggtgtacgacaactca
ttcagtggcgactttgagattgtgtgggaaaaagacgatatggagatagccctaaaccac
acagagaattctggatatttcatagaggatggtatactgcagatcgtcaacgtcagccac
agagatcagggcatgtacaagtgtgtggccagtactccaatggatcaggacactgcctct
gcactactcatggtgctggacatcccacatgcacctgagaatttggtgctatctgaacac
aagggcagaagtgtgaagctcaaatggatcactggggaggaccacaacagctcaaccact
gagttcattattgagtatgaggagagccagtgggagccggggacctggagagagcttcag
agagttcctggaaatcacggctcggcagtcctcaaactttacggacatgtcgactatcgc
ttccgagtgtctggagttaacacagtgggcagagggcgccccagtgagcccacagagaga
tacaagacccctcccgcagcccctgacaagaaccctgaaaatatcaaaattgaaggtcat
ttgccacatgaaatggatatcaactgggagccattgtcccccattgaacacaatgggcca
ggccttgaatataaggtgagttataagagacagcatgtggaggaggactggcaggagcat
gtggtgaagagacactcgtttgtggtgaaggacactcccacgtttgtgccatatgagatc
aggatccaggcaaggaaccaccagggatggggacctgaacccaaagtggtgacgggctac
tctggagaagacttcccctctgcggctcctgatgatgcagcggtggaggtgatgaacaac
tcgctggtcaaggtcagctggacgcgtgttcacaaggacaagctgcatggacatctggga
ggctacaggataaactggtggcggctgcgtagtctgctggactcaaagaagactcacggg
gacaaacacactctgacattcccgggggaccggaaccatgccatggtaccagggctcacg
cccttctctgagtacagcctcatcgtcatgaccttcaacaggcgaggcaatgggccaggt
agccacgccgtcaacttcaaaaccccagagggagttccagagaaaaacccagttttcagg
gtcacagatgttcagaagcacactgtcactctcacctgggcacctcccctggaggtcaac
ggagtccttacaggatacctgctagagtatcagctgatcaacgacacagaggaggtgggt
gtcctgcagactgtggacataagcaaccctgacatcaccacgtgggtcctgcagaacctg
gaggccatcagcagatacaagttctacctgcgcccctgcaccagggtgggctgtgggccc
tgggtcagcaaggagagcaccaccacgcctgaagcacgtctggcaagcatccatggagga
atctctacccagggctggttcatcggactgatgtgtgtcgtggctctcctcacactcttg
gtgttaatcgcctgctttgtcaacagaaataaaggagggaaatattccgtaaaggagaaa
gaggatcttcacccagacctagaatcccagggtatccatgatgacaccttctgtgaatac
agtgacaatgatgagaagccactgaagggcagccagcactctctgagcggacagatcaaa
gcagaggacagtggggacagcctggtggactatggggatgaggacatccagttcaacgag
gatggctcctttatcggcgagtacgcaggtcgcaaagaaaagaaggtgtccatggaagtc
aaaggaaccaccaatcagagcacagcgtga
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