Salvelinus namaycush (lake trout): 120059414
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Entry
120059414 CDS
T07522
Symbol
ppih
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase H isoform X1
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120059414 (ppih)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120059414 (ppih)
03110 Chaperones and folding catalysts [BR:
snh03110
]
120059414 (ppih)
Enzymes [BR:
snh01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120059414 (ppih)
Spliceosome [BR:
snh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120059414 (ppih)
Chaperones and folding catalysts [BR:
snh03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120059414 (ppih)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
120059414
NCBI-ProteinID:
XP_038864371
UniProt:
A0A8U1C084
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All DBs
Position
Sna14:complement(33252886..33289623)
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AA seq
177 aa
AA seq
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MNVQPSNPNNPIVFFDVTIGGQEVGRMKVELFADVVPKTAENFRQFCTGEFRKDGVPIGF
KGCTFHRVIKDFMIQGGDFVNGDGTGICSIYRGPFADENFRMKHSAPGLLSMANSGPGTN
GCQFFITCTKCDWLDGKHVVFGKVVDGLLVMRKIENVPTGPNNKPKLPILIAQCGEM
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcagccttctaaccccaacaacccgattgtgttctttgatgtcaccattgga
ggacaagaagttgggagaatgaaggtagaactctttgccgatgtggttccaaagacggct
gagaactttcggcagttctgcacaggggaattcagaaaagatggtgtccctatcggattt
aaaggctgcaccttccacagggtgataaaggacttcatgatccaaggcggggactttgta
aatggtgatggtacaggtatctgcagcatctacagaggaccatttgcagatgaaaacttt
agaatgaagcactctgcccctggcctcctatccatggcaaacagtggccccggaaccaat
ggctgtcagtttttcattacctgtacgaaatgtgactggctagatggaaagcatgtggtc
ttcgggaaagtggtcgacggcttgcttgtcatgagaaaaattgagaacgttcctaccggc
ccaaacaacaagcccaagcttcccatcctcatagctcagtgtggggaaatgtga
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