Salvelinus namaycush (lake trout): 120059418
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Entry
120059418 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5-like
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120059418
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120059418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
CHDCT2
Helicase_C
DUF1087
PHD
CHDNT
Chromo
HDA2-3
ResIII
PHD-1st_NSD
PHDvar_NSD
DEAD
Pox_Ag35
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
120059418
NCBI-ProteinID:
XP_038864385
UniProt:
A0A8U1BVJ4
LinkDB
All DBs
Position
2:15784567..15823634
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AA seq
2004 aa
AA seq
DB search
MKEGKMPKVKKRKKEGGGGGGIGVGGNDLEEQASEREDGHPLQRPEIGSESESSTYAPTT
KKKKKKPKEKKEKKPKRKKREEEEEDDDDDDDDDDDDDDDNNKEPKSSSQLMQEWGLEDV
QYGFTEEDYTTLTNYKAFSQFLRYSTCRVIIYCLSYNSVLSLTFLRPLIAKKNPKIPMSK
MMTVLGSKWREFSANNPFKGTSATAVAAAVAAAVEMVTVASPISVKEVTTLPSSQPGPIR
KAKTKDGKGPGVRRKTKTVKEVKKKSKGKKTKSKKKASSSEEDFGLEESDFDDVSIHSAS
VRSDTSGNAKKKARKGRKKRKREDGDGYETDHQDYCEVCQQGGEIILCDTCPKAYHLVCL
DPELEKAPEGKWSCPHCEKEGIQWEAKDDDDDEEVAVEEEDDHLEFCRVCKDGGELLCCD
TCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQRILHWTWGDPPLPMEVPPGPDG
EMVDPLVKPPLKGHPERELFVKWAGLSYWHCSWVSELQLELYHAVMYRNYQRKNDMDEPP
PYDYGSGEEELNNEKRKSKDPQYAAMEERFYRYGIKPEWMVIHRILNHSYDKDGDVHYMI
KWRDLPYDQCTWEVDDFDVPEYNHSKHSYWDHREQMIGDDQRPLVVRKGKKGKEEEKKRE
REIPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLG
KTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAVI
RENEFTFEDSTVKTGRKVFRMKKDSAIKFHVLLTSYELITIDQTILGSINWACLVVDEAH
RLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD
ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKFILTRNFEA
LNSKGGSNQVSLLNIMMDLKKCCNHPYLFPVAAMEAPVLPNGSYDGNQLVKSSGKLTLLQ
KMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGSITGGLRQEAIDRFNAPG
AQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVT
RASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEMEAAAR
AMGSHQKLFCVPLTQYIVNLVFTPGDIKDGDEGSVIHYDDNAISKLLDRSQNATEDTEIQ
NMNEYLSSFKVAQYVVKDEDVEVRTHTLRHTLSQHXRCLCLGVALLCILTEEPQREIIKQ
EENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDDLSDNHSE
YSVGSEDEDEDFEERPEGGRRHSRRQLKSDRDKPLPPLLARVGGNIEVLGFNTRQRKAFL
NAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPRE
GLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPLGLELKKLTESLSSDPNTPVPA
SPAATPQPPGTPVPPEKMDSISGPTEDKETTELEYKKLPELEVRSSSQVEKTDKAADSDE
TVKGSTEDKPVSSEESSERTDTPSTLPEPSTNPKDPPSKQTELSSNQSSPKAEPCRETEK
SLDKGDSDPAPAKPEEKELKPVFSDEPKSEDMPVPEGRLNGEKEAQEETEDIRREVEKNG
FKMRFMFNIADGGFTELHTLWQNEERAAVSSGKMYDIWHRRHDYWLLAGIVTYPSSASYR
ALLEQALVIEEQLRRAAYLNMTQDPNHPAMALNTRFAEVECLAESHQHLSKESLAGNKPA
NAVLHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGNEPPPQ
QPFGQSSFAYSQMYSTGFGGSFRGPAGGAMVNYSQMPLGPYVSVSNGPPPPSSHLDKKSC
DPLRDVTTPDLKSGKPSDVICIED
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagggcaagatgcccaaagtcaagaagaggaaaaaggagggaggaggaggtggt
ggaataggagttggtggcaatgacctggaggagcaggcctcagagcgggaggatggccat
ccactgcaacgtccagagattggctccgagagcgagagcagcacctacgcccccaccaca
aagaagaagaagaagaaacccaaggagaagaaagagaagaaacccaaacggaagaagaga
gaagaggaggaggaggacgatgacgatgatgatgatgacgacgatgatgatgatgatgat
aataataaggagcccaagtcatccagccagctgatgcaggagtggggtctggaagatgtg
cagtatggcttcacagaggaggactatacaaccctcaccaactacaaggctttcagccag
ttcctcaggtactcaacatgtagggtcataatttattgcttgtcttacaacagtgttctt
tccctgacttttctcaggccacttattgccaagaagaaccctaagatccccatgtcaaag
atgatgacagtgttagggtccaagtggcgcgagttcagcgccaacaatcccttcaaaggc
acctccgcaaccgctgtggctgccgcggtggctgctgctgtggaaatggtcactgtggcc
tcgcccatctctgtcaaagaggtcactaccctaccaagctctcagcctgggccaatcaga
aaagccaaaaccaaagatggaaaggggcctggggtaagacggaaaacaaagactgtaaag
gaggtgaagaagaaaagtaaagggaagaagaccaaatcaaagaagaaagcatcctcgagt
gaggaggactttgggctggaggagtcagactttgatgatgtcagcatccacagtgcctcg
gtgcgctctgatacctcggggaatgccaagaagaaagcccggaagggtcggaaaaaaagg
aaaagagaggatggggacggctatgagacagaccaccaggactactgtgaggtgtgccag
cagggaggggagatcatcctgtgtgacacctgtcccaaagcttaccacctggtgtgtctg
gaccccgagctggagaaggcccccgagggcaagtggagctgcccccactgtgagaaggag
ggcatccagtgggaggccaaagatgatgatgatgatgaggaggttgcggttgaggaagag
gatgaccacctggagttctgcagagtgtgtaaagatggaggggagctgctgtgctgtgac
acctgcccctcctcctaccatatccactgcctcaaccctcccctgcctgagatacccaat
ggggagtggctgtgcccacgctgcatgtgcccacctctgaaggggaaggtacagaggatt
ctccactggacttggggggatccccccttacccatggaggtgccccctggccctgatgga
gagatggtggacccgctggtcaagccccccctgaagggccacccggagagggaactgttt
gtcaagtgggctggtctctcctactggcactgctcctgggtcagcgaactacagttagag
ctgtaccacgcggtgatgtaccgtaactaccagcggaagaacgacatggacgagccccct
ccatacgactacggctctggggaggaggagctgaacaacgagaagaggaagagtaaagac
ccgcagtacgctgccatggaggagagattctaccgctacggcatcaagccagagtggatg
gtcatccacaggatcctcaaccacagttatgataaggatggagatgtgcactacatgatc
aagtggagagacctgccctatgaccagtgcacctgggaggtggatgactttgacgtccct
gagtataaccacagcaaacactcctactgggaccacagggagcagatgattggtgatgac
cagcgccccttagtggtgagaaagggaaagaagggtaaagaggaggagaagaagagggag
agagaaatcccccctgatgccccaattatagatcctaccatcaagtttgaacatcaaccc
tggtacatcaatgccactgggggcaccctgcatccgtaccagctggagggtctgaactgg
ttacggttctcctgggcacagggcacagacactatcctggcagacgagatgggcctgggc
aagactgtccagaccatcgtgttcctctactcactctacaaggagggtcactccaaaggg
ccatacctggtcagtgctcccctgtccaccatcatcaactgggagagggagtttgagatg
tgggccccagacttctacgtggtcacttacactggggacaaagatagccgagcggtcatc
agggagaacgagttcacttttgaggacagtacagtcaagacaggccgcaaggtcttccgt
atgaagaaagacagtgccatcaagttccatgtgttgttgacatcatatgagctgattacc
attgatcagaccattctgggctccattaactgggcctgtctagtggtggacgaggcccac
agactgaagaacaaccagtcaaagtttttcagaatcctcaacggttataagatctactat
aagctgctactgactggcactcctctgcagaacaacctggaggagctgtttcacctgctc
aacttcctcaccccagagagatttaataacctggagggctttctggaggagtttgcagac
atctccaaggaggaccagatcaagaagctgcatgacctgctgggcccacacatgctcagg
agactgaaggctgatgtcttcaagaacatgccttccaagacagagctcattgtacgagtg
gagctcagccccatgcagaagaagtactacaagtttatcctgacgcggaactttgaggcg
ctcaactccaaaggcgggagcaaccaggtgtcccttctcaacatcatgatggacctgaag
aagtgttgcaaccacccctacctgttcccagtggcagccatggaggcgccagtgttaccc
aatggctcttatgatgggaaccagctggtcaagtcctcaggcaaactcaccctgctccag
aagatgctgaagaaactcaaagatgaaggacacagagttctcatcttctcccagatgact
aagatgctggatctgcttgaggactttctggaatacgagggctacaaatatgaacgcatc
gatggaagcatcacaggggggctacgacaggaggctatcgaccgcttcaatgcaccgggc
gcacagcagttctgcttcctgctctccacccgagcgggaggcctgggcatcaacctagcc
acggcagacactgtcatcatctacgactcagactggaaccctcacaatgatatccaggca
ttcagcagggcccaccgtataggtcagaacaagaaggtgatgatctatcgcttcgtgaca
cgggccagcgtggaggagcgcatcacccaggtggccaagaggaagatgatgttgacccac
cttgtggtgaggcccggcctgggctccaagaccggctccatgtccaaacaggagctggac
gacatcctcaaatttggcactgaggagctcttcaaggatgagatggaggcggctgctcgg
gccatgggttcccaccagaaactgttctgtgttcctctgacacagtatattgtgaatctt
gtgtttactccaggggacataaaggatggagatgagggcagtgtcattcactatgatgac
aatgccatctccaagctgctggaccgtagccagaatgctacggaggacactgagatccag
aacatgaacgaatacctcagctccttcaaggtggcccagtatgttgtcaaagacgaggac
gttgaggtaaggacacacacactcagacacacactcagtcagcattgaaggtgtctatgt
ctaggagtggctctgttatgtattctcacagaggagccccagcgggagatcattaagcag
gaggagaatgtggatccagactactgggagaagctgctgaggcaccactatgagcagcag
caggaggacctggcccgcaacctgggcaaaggcaaacgcatccgcaagcaggtcaactac
aacgacacgtctcaggaggaccaagagtggcaggatgatctttcagacaatcattccgag
tactccgtggggtccgaggacgaggacgaagatttcgaggagaggccggaaggtgggcgc
aggcactctcgcagacagctgaagagtgacagggacaaacctctgccacccctgctggca
cgcgtagggggcaacatcgaggtgctggggttcaacacccgtcagcggaaggccttcctc
aatgctatcatgcgctggggcatgcctcctcaggacgccttcaactctcactggctggtc
agagacctgagagggaagagtgagaaagagttcagggcctatgtgtccctgttcatgaga
catctttgtgagccgggggcagacggggcggagacctttgcagacggtgtcccacgagag
gggctgtctcgccaacatgtcctcaccaggatcggagttatgtctctggtcaggaaaaag
gtccaggagtttgagcatgtcaatggaaagtacagcactccagacctgatcccacttgga
ctagagttgaagaaactgactgagagtctgtcctctgaccccaacacccctgtccctgcc
agccctgcagccacaccccagcctcctggcactcctgtcccaccagagaagatggactca
atctcagggcctactgaagacaaggagaccacagaattagagtacaagaagctaccagaa
ctggaggtcagatcatcttcccaggtagagaagacagacaaggctgctgacagtgatgag
acagtgaagggcagtacagaggacaaaccagtctcctcagaggagagtagtgaaaggaca
gacacaccctccacacttccagagccatccaccaatcctaaagatcctccatccaaacag
acagagctgtcgtccaatcaaagctcaccaaaagcggagccttgtagagagacagagaag
tctttagataaaggagacagtgatcctgccccagccaaacctgaggagaaggaactgaag
ccagttttttcagacgagcccaagagtgaggacatgccagtgcccgagggtcggctgaat
ggtgagaaagaagcacaggaggagacagaggacatcaggagggaggtggagaagaacggc
ttcaaaatgaggttcatgttcaacatcgctgacggaggcttcacagagctacacaccctg
tggcagaacgaggagcgggccgctgtgtcatctgggaagatgtatgacatttggcaccgt
cgccacgactactggttgctggctggcatcgtaacgtatccttcctctgcatcttacaga
gctctgttggagcaggctctggtgatagaggagcagttaagaagggcagcgtacctgaat
atgacccaggaccccaaccacccggctatggccctgaatacccgctttgctgaggtggag
tgtctggctgagtcccaccagcacctgtccaaggagtctctggccgggaacaagccagcc
aacgctgtgctgcacaaagtactgaaccagctggaggagctgctgagtgatatgaaggca
gatgtgacgcggcttcccaacatgttgtcccggatccccccggtgtctgctcgtctgcag
atgtctgagaggagcatcctcagccgcctcaccagccgcggcaacgaacctccgccccaa
cagccgttcggccagagctcatttgcctattcccagatgtacagcactggttttgggggc
agcttccgggggcctgcgggaggagccatggtcaactacagccagatgcccctgggacca
tacgtcagtgtgtccaacggccccccacccccgtccagccacctggacaagaagtcctgc
gaccctctgagggacgtcaccacccctgacctcaagtcaggcaagcccagtgatgtcatc
tgtattgaagattag
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integrated database retrieval system
