Salvelinus namaycush (lake trout): 120059425
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Entry
120059425 CDS
T07522
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120059425
03036 Chromosome and associated proteins [BR:
snh03036
]
120059425
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120059425
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120059425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
IQ_SEC7_PH
Beta-prop_RSE1_2nd
SOS1_NGEF_PH
RHG20_PH
DUF7675
Motif
Other DBs
NCBI-GeneID:
120059425
NCBI-ProteinID:
XP_038864398
UniProt:
A0A8U1C7S7
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All DBs
Position
Sna2:15830182..15954757
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AA seq
1302 aa
AA seq
DB search
MSTVNYQQQQREEEEEEDEEQGEKFEFDDSADEEKDPVEAMQTANESSMEATSQPQDNAV
TTPLAHSQQHLNAMPPAGQEDNPSQGQDSTASSDVPVSNPPRRVSGPVELVEPIAAAPSV
GEQPREESQEGSGPGDVLPVENQTDSEDHSVETEKKSSSLREHSEGEGVDDDEADAPLQT
GSPEVIYDDVPCEGPLSPDEGDMIYEDVHREEMPQGAGNGWSSSEFESYDEQSDTESKLP
TRSKQYSPDVRRLRERCARTKREIAMRLGGKNNYDTKVHQLMKAARSGTKDGLDKTKIAF
MRRVSFLHKKDHSEDVEDDAGYLDVAVSEVKQPPAQLSPMPEGLSSQQVVRRHILGSIIQ
SERSYLESLRRILQEYQRPLLEADPRILSPRKIRPIFHRLREITQCHSMFQIALASRVAE
WDSSEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACMSKPAFLEFLKKKQASSI
DRITLYGLMVKPIQRFPQFILLLQDMLKNTPKGHVDRLPVQLALTELEMLAEKLNEQKRV
ADQIAETQQLARSVSDRSLSKQLNSDQGSLVLCETLIETVYGERSQVLKSKERKVFLFND
ILICANINIKGPPDISSLVPVGPKYTMKWSAPLLQVQVVEVGQEASQAKDTLFQHGGAKH
PGSACPPGKVILGPPRLYQELQELQHDLSVVEEISLLVGTLQGTYQNLNTTVAQDWCLAL
QRLIRIKEDQIQSANKCRLRLQVPGRPDKSGRPVSFMVVFNTPSPLSKISWVNRLHLAKV
AQREENTPGWFCAEDEGKTMAPFWPLLTCRVPVFATKSSDRKLEAALHNPVQCALLGFSA
TSTPLPQGYLWVASGGDATQGQVEIFSLNRPTPRPVKSLQVGAPVRCLEYVPEPSPPEEM
EAVALRSPTGVGNTICLGLDDGRILVYGSVDTAAQCLLTLCNPQRCPVLCLKHSINFLFA
GLRDGTMMVYGRSNGGELWETDSCRTVSVGPEPVRTLLVLEDSVWASCANSVTVIKGSSL
STQRFEVHPEPMVSVAHMVRAGGGVWMAFSEGSSIRLFHTETLEHLQEINISTRVSLHNP
GQKSMRVTSLLICQGLLWVGTAQGVIITLPVPKLEGIPKITGKGMTSLNAHCGPVDFLVA
TSSTLSAELLKRDSVGDGPDSACGGEDRSDSSSQESLQQAGCSQGEGRGKGRGVLLQYRL
RSTSGLPGRALTARGDEASDSSLESLEQRLEDGSIYELSDDPEMWVRGRPCERDRGRRDR
VTSAAVISGGRGFQRLREGTAERTGVESSETTLMVWQLPLTV
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgtgaattatcagcagcaacagagggaggaagaggaggaggaagatgaagag
caaggagagaagtttgagtttgatgacagtgctgatgaggagaaagacccagtggaagcc
atgcaaacggcaaacgagtcatctatggaggccacaagccaaccacaggacaatgcagta
acaacaccccttgcacactcacaacagcacctcaatgcaatgccccctgctggtcaggag
gacaatccctcacagggacaagactccacggcctcttcagatgttccagttagcaaccca
cccaggcgggtctctggcccggtcgagctggttgagcccattgctgcagcaccttcagtg
ggagagcagccccgggaggagtcccaggaagggtctggtcctggagacgtgttaccagtg
gagaaccagacagactcggaggaccatagtgtggagactgagaagaagagctccagcctg
agggaacactctgaaggtgaaggtgtggatgatgatgaggccgatgcaccactccagaca
gggagcccggaggtgatctatgatgacgtgccctgtgagggaccactctctcctgacgaa
ggggacatgatctacgaggatgtgcacagagaagaaatgccccagggtgcaggcaacggt
tggagctccagtgagtttgaaagttacgacgagcagtctgataccgagagcaagctacca
acccgcagcaagcagtactcccctgacgtgcgtcggctgagggagcgttgtgccaggacc
aaacgtgaaatagccatgaggctgggtgggaaaaacaactatgacaccaaggttcatcag
ctaatgaaggccgctagaagtgggaccaaggacggattggacaagaccaaaatagccttc
atgcggagagtctctttcctgcacaagaaggaccactcagaggatgtggaggatgacgca
gggtacctggatgtggctgtgtcggaggtgaaacagcctcctgcacagctgagccccatg
cctgagggactgagcagccagcaggtggtcagacgccacatcctgggttccatcattcag
agtgagcgcagttatcttgagtccctcaggagaatccttcaggagtaccagaggcccttg
ctagaggcggacccacgcatcctgagcccacggaagatccggcccatatttcaccgtcta
cgggagatcactcagtgtcactccatgttccagatcgcactggcatcacgtgtggctgag
tgggacagcagtgagaagattggggacctatttgtggcctcgttttccaagtccatggtg
ctagatgtttacagcgactatgtcaataacttcaccaatgccatggcccttataaaaaag
gcatgcatgtccaaaccagctttcctggaattcttaaagaagaagcaggcgtccagtatt
gaccggatcaccctgtacggcctcatggtgaagcccatccaacgctttccccagttcatc
ctattactgcaggacatgctgaagaacacacctaagggtcacgtagaccgcctgcctgtg
cagctggctctgactgaactggagatgctggccgagaagctgaatgaacagaagcgtgtg
gccgaccaaatagctgagactcagcagctagcacgcagtgtcagcgaccgctcgctcagc
aagcaactgaactcagaccaggggtcactggtgctttgtgagacgttgattgagacggtg
tatggggagcgaagccaggtcctgaagtctaaggagcgcaaagtcttcctcttcaacgac
atactcatctgtgccaacatcaacatcaaggggccccctgatatcagcagcctggtccct
gttggtccaaagtacacaatgaagtggagcgcccccctgctgcaggtccaggtggtggag
gtcggtcaggaggcctcccaagccaaggataccttgttccagcatggcggtgccaagcac
cctggcagtgcctgtcccccagggaaggtgatcctgggtcctcctcggctctaccaggag
ctccaggagctgcagcacgacctgtctgtggtagaggagatctcactactggtgggaacg
ctacaggggacataccagaacctgaatacgaccgtggcccaggactggtgtctagctctc
cagagactcatccggatcaaggaggatcagattcagagtgccaacaagtgccgcttacgc
ctgcaggtgcctggaagaccagacaagtcgggacgtcccgtcagcttcatggtggttttc
aacacccccagtcccctcagcaagatctcctgggtcaaccggctgcacctggccaaggtc
gcacagcgagaggagaacacaccaggatggttctgtgcagaagatgaagggaagaccatg
gcaccattttggcctttactcacctgccgtgtgcctgtcttcgccaccaaatcctcggac
aggaagcttgaagctgcccttcacaatccggtgcagtgtgctttgctgggcttctctgca
acgagcaccccgctacctcaaggctatctctgggtggccagtggaggagatgctacccag
gggcaggtggagatcttctccctgaacaggcccacgccacgcccagtgaagagcctccag
gtgggggccccagtgaggtgtctggagtatgtgcctgaacccagccccccagaggagatg
gaggctgtggccctcaggagccctactggggtggggaacaccatttgtctgggactggac
gatggaagaatcctggtgtatggcagtgtggacactgcagcccagtgcctgttgaccctg
tgtaatcctcagcgctgccctgtcctgtgcctcaaacactccatcaacttcctgttcgct
gggctcagagatggaaccatgatggtgtatggacgaagtaatggtggtgagctgtgggag
acagactcctgcaggactgtgagtgtgggcccagagcctgtgcgaactcttctggtactg
gaggactctgtgtgggccagctgtgccaactctgtgaccgtcatcaagggctccagcctt
tccactcagaggtttgaggtgcacccagaacccatggtgagcgtggcccatatggtgcgg
gctggaggaggagtctggatggcctttagtgagggctcttctattcgcctgttccacact
gagacactggagcatctgcaggaaatcaatatctccacacgagtatctttgcacaaccca
ggccagaagagcatgcgtgtcaccagcctgctcatctgccaggggcttctgtgggtgggg
actgcccagggagtcatcatcaccctgcccgtgcccaaactggagggcattcccaaaata
acaggaaaggggatgacctctctgaatgcccactgtggtccggtggacttcctggtggcc
acctccagcaccctgtccgcagagctgctgaagagggactctgtgggggatggacccgac
tctgcctgcggaggggaggaccgcagtgactcctcctcccaggagtctcttcagcaggca
ggctgctcccagggggaggggcggggcaaggggcggggtgtgctgctacagtacaggcta
cgctccacgtcggggttgccggggcgagcactgacggcacggggcgacgaggcgtctgac
tcctctctggaatctctggaacaaagactggaggacggctccatctatgagctcagtgac
gaccctgagatgtgggtgcgggggcgcccctgtgagcgagacagggggcgtagggacagg
gtgacctcggccgcggtcatatccggtggcaggggcttccaaagactgagggaagggaca
gcagagcgcacgggtgtggagtcttcagaaacaaccctgatggtatggcaactgccacta
actgtgtga
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