Salvelinus namaycush (lake trout): 120059446
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Entry
120059446 CDS
T07522
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120059446 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120059446 (xpc)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120059446 (xpc)
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GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
120059446
NCBI-ProteinID:
XP_038864423
UniProt:
A0A8U1BXI1
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Position
Sna14:35566737..35578277
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AA seq
896 aa
AA seq
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MAKRKESADTAVKTDTKKLKKVAKGKAGGLRAKKENGEETEKVPRKAKHKSHLSKPIVGD
TTENHTSKYFQDKTPVKEEPADMSPESDIIPPFIRARKDTVKPVKKEEEEDEDSEEDEDW
EEVEGPVEPEEPALPSQPVEIEIETPDITHKRQKREKRKAEFETYLRRMMNRFNKDVVED
THKVHLMCLLANGMFRNRLCSTPDLLAISLSLLPTHFAMVAKERIDTNYVSGLLKWFGAT
FTLNPELPCEERPDPQGLLERRLGSLTARDHQEMTHLFLLMLRSLQLFCRLVLSLQPLSL
KPPSAKSKAKNSGSPPRKSPSQKKPPKESPSEPKVSPGSKRPAGGKAERGGKKAKKKEAG
ETGKAVSVGQKPKNSKRRSIASKVSYKEESSEGEGPSDGEEFQLTNEEDSEDSEGGVRAK
KVKGGKSKGKSTAPQKTSSGGKKKVKSEEEDDDWEGNEEEGEEEQGMKRGKRKEGKGADE
WLEVYLEKTGCWVCVEVLQGVGQPQLCSKQATHPMTYVVAVDGDGHLKDLGSKYDPTWMT
STRKRRVDEEWWEVTLEPFLGPESERDVQEDKELQLKLLDKPLPTSIAEFKNHPLYALKR
HLLKYEALYPSTAAILGYCRGEPVYSRDCIHTLHSRDTWLKEARTVRLGEEPCKMVRGFS
NRSRKVRMASEQKDKDDLALFGEWQTEEYQPPVAVDGRVPRNDFGNVYLFKPCMQPVGCV
HLRLPNLQRVAKKLDMDCAAAVTGFDFHGGYSHAVTDGYIVCEEHEEILRAAWVEDQEIQ
RQKEKEKREKRAVANWTLLVKSLLIRERLQRRYGKKGPTPGGGLDQLKSQDREGVEGLSS
EEEGEGGPNTASAALAQAWPQNRQGEQDSGTGGSSKTTSKRQKRGQEKHLFPFEKV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgtaaagagtctgcagacacagcagtgaagacggacacaaagaaactgaag
aaggttgcaaaaggcaaagctggaggactaagagccaaaaaagagaatggagaggaaacg
gagaaggttccgagaaaagccaagcacaaatcccatctctctaaacctatagtaggggac
acaaccgaaaaccacaccagcaaatacttccaggacaagactccagtgaaggaggagcct
gctgatatgagtcctgagagtgatatcatccctccttttatcagagccagaaaagacaca
gtaaagcctgtgaaaaaagaagaagaagaagatgaggacagcgaggaggatgaagactgg
gaggaagtggaaggtccagtggaaccagaagagccagccctgccctcacagcccgtggag
atagagattgagaccccagacatcacccacaaaaggcagaaaagggagaagaggaaggcg
gagtttgagacctatttgcgacgcatgatgaaccgcttcaacaaagatgtggtggaggac
acacacaaggtccacctcatgtgtcttttagccaacgggatgttccggaaccggttgtgt
agtacaccggacctgctggccatcagcctgtctctgctgcccacccactttgccatggtg
gccaaggaacgcattgacaccaactacgtctctggcctgctcaagtggtttggggcgacg
ttcacgcttaacccggagcttccctgtgaggagaggcccgacccacagggcctgctggag
aggaggctgggcagcctcaccgctagagaccaccaggaaatgacacatctgttcctattg
atgctgaggtcgttacagctcttctgtcgactggtgctctctctgcagcccctgtcactg
aagcccccgtcagccaagagcaaggccaagaactcaggcagtccgcctaggaagagtcca
tcgcagaagaaacctccaaaagagagcccctcagagcccaaggtatccccagggtccaag
agaccggcaggggggaaggccgagagaggagggaagaaggcaaaaaagaaagaggcaggg
gagacgggaaaggctgtgtcggtgggacagaaacccaagaactccaagcgccgcagcata
gcctcgaaggtgagctacaaagaggagagcagtgaaggggaggggccaagtgatggggag
gagttccagctgaccaatgaggaagacagtgaggactctgagggaggagtcagagccaag
aaagtaaaaggaggtaagagcaagggcaagagtacagctccacagaaaacaagtagtgga
ggcaagaagaaagtgaagagtgaagaggaggatgacgattgggagggaaacgaagaggag
ggggaggaagagcaggggatgaagcggggcaagaggaaggaggggaagggtgcagacgag
tggctggaggtgtacctggagaagactgggtgctgggtctgtgtggaagtgctgcagggc
gtggggcagcctcaactgtgctccaagcaggccacccatcccatgacctacgtggtagcc
gtggacggggacggtcacctgaaggatctgggcagcaagtacgaccccacctggatgacc
tccaccagaaagcgccgggtggacgaggagtggtgggaggtgacgctagagccattcctc
ggccctgaatccgagagggacgtccaggaggataaagagctccagttgaagttgctggac
aagccattgcccacgtcgatagcagagttcaaaaaccacccgctgtacgccctgaagaga
catctactgaaatatgaagctctctacccctccacagcggccatcctcgggtactgcagg
ggagagcctgtctattccagggactgtattcacacgctacactcccgagacacctggctg
aaggaggcgcgcaccgtccgtctaggagaggagccctgcaagatggtgagagggttttcc
aatcgctctcggaaagtcaggatggcgtcagagcagaaggacaaagatgacctggctctg
tttggtgaatggcagacagaggagtaccagcccccagtagctgtggatggcagggtgcct
cgtaacgacttcggcaacgtttacctgttcaagccctgcatgcagccagttggctgtgtc
cacctgcgtctgcctaacctccagagagtggctaagaagctggacatggactgtgccgct
gctgtcactggctttgactttcacggtggctactctcatgctgtaacggacggctacatt
gtgtgtgaggagcatgaggagatcctgagagcagcctgggtggaagaccaagagatccag
agacaaaaggagaaagagaagcgggaaaagagggcagtggctaactggactctgctggtg
aagagcctgctgatcagggagagactacagcgtcgctatgggaagaaaggcccaaccccc
ggaggaggcctggaccaactgaagagccaggatagggaaggggtagagggtctatcgtct
gaagaggaaggggaaggtgggccgaacacggcttctgccgcactggcacaggcctggccc
cagaacagacagggggagcaggacagtggcacggggggatcctccaaaactacatccaaa
cggcagaaaaggggccaggaaaagcaccttttcccctttgagaaagtatga
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