Salvelinus namaycush (lake trout): 120059466
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Entry
120059466 CDS
T07522
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120059466
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120059466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120059466
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
SR proteins
120059466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
DbpA
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120059466
NCBI-ProteinID:
XP_038864464
UniProt:
A0A8U1C8K7
LinkDB
All DBs
Position
Sna14:complement(36508985..36512963)
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AA seq
335 aa
AA seq
DB search
MPRVYVGKLSYHAREKDIHRFFNGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYSGGGGGRSSSGYSSSRSRTGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDMRRALDKLDGTDINGRKIRL
VEEKSRRRRSYSGSCSRSRSRRRSRSRSSRSRSISRSRSHSRSKRRRSRSGRKSRSRKSR
SRSRTSKSRSRSDKSKSRSKSRSKVKSERDSSSPSKEKLASKKSRSRSASPIGNGKKEPS
SRSPSPAADRRSKSPDKRSVSRSPSRSRSRSASRD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgtctatgttggaaaactaagttatcatgctcgagaaaaagacattcatcgg
tttttcaatggctacggaaagctcatggaaattgatctgaaaaatggatatggctttgta
gagtttgaggacaatcgcgatgcggatgacgctgtgtatgaactgaatggcaaggagttg
tgcggggagcgtgtgaccgtggaacatgcaagaggaccgcggcgcgaccgagatggatat
agtggtggcgggggtggtcgcagtagtagtggttacagcagcagcagaagccgcactggc
agggataagtacgggccacctgtccgtacggagtaccggctgatcgttgagaatctgtcc
agccgctgcagctggcaggatctgaaggatttcatgcgccaggctggagaggtcacgtac
gctgatgcccacaaggagcgtaccaacgagggtgtcatcgagttcggctcgcgttcggac
atgaggagggccctggacaagctggacggcacggacatcaacgggaggaagatccgcctg
gtggaggaaaagtctcgccgccgccgctcctactctggcagctgctccaggtctcgcagc
agacgtcgctctcgtagcaggagcagccgctccaggagtatctccaggtcccgatcccat
tctcgcagcaagagacgtcgctctagatctggaaggaagtcacgttcccgcaagtctcgt
tcccgctctcgcaccagcaaatccagatcccgctctgacaaaagcaagtcccgttccaag
agccgttccaaggtgaaatccgagcgggattccagcagcccctccaaggagaagttggcc
agcaagaagtcccgtagccgctcggcgtcccccatagggaatgggaagaaggagccgtcc
tctcgctccccgtccccagcagctgaccgtcgctccaagtctccggacaagcgatctgtc
tcccgctccccatctcgctccaggtctcgatcagcttcccgagattaa
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