KEGG   Salvelinus namaycush (lake trout): 120059474
Entry
120059474         CDS       T07522                                 
Name
(RefSeq) aladin-like isoform X1
  KO
K14320  aladin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120059474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120059474
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120059474
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N eIF2A PD40 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 120059474
NCBI-ProteinID: XP_038864482
UniProt: A0A8U1C2J1
LinkDB
Position
Sna14:36870553..36878030
AA seq 520 aa
MMCSLALFPPPLSGDGETSQYNESNTDPSVWFGDSPALNLYFPRESLKPHSRPESSSKSA
FRDHCETLYTRSAGAWRDAGLSGLLNEIANSSAEVPKWLGVSSSCVLALLRWVSSFHSSL
FPHLTLSSEEMTVEFSQVLDWSDCAVRSFAWHPHTQKCAVALSDDSIKIYNPKRLSLSQC
ATTPTLKHRLQRSVAALQWKPLCASALAVACHNCLLVWHVDPTSLSTRPSSGCAQVLSHP
GHSPVTSVAWSPNGPLLVSASPRDTAMLVWDVAVESCVPLHRVGGGGVTYLSWSPDGSRV
LAATPSSLFRVWETRMWTCERWPSLKGRCQSGCWSPDGSRLLFSVQGETVIYALTFTDNP
GVPLMMSGGPKAATVVADLSETTLNTPDGDITVGGEIQSMAWDPRGERLAVLVKGDAEAG
RPAMIAVFKTQISPAFKLLPCGFVQGEAGTEPRLMQFNPNYQHGAQLTVCWSNGKITHVP
FCFMSAGNPQPGLGGSPSVPLSQGRPADYNNQTLYTELIS
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgatgtgttctttggcactgttccccccaccgctgtccggcgatggagaaacttctcaa
tacaacgagtccaacacggatccatccgtctggtttggggattcacctgctctgaatctg
tacttcccgcgagagtcactgaagcctcacagccggccagagagcagcagcaagtcagct
tttagggaccactgtgagacgctgtacacaaggagtgcaggggcttggcgtgatgcaggc
ctgtctggactcctaaatgagatcgccaactccagtgcagaggtgcccaagtggctaggg
gtgagctcgagctgcgtcctggccttgctacgctgggtctcctccttccacagctctctg
tttcctcacctcacattgagcagcgaggaaatgaccgtcgagttttcccaagtgctggac
tggtcggactgtgcagtgcggagctttgcctggcacccacacacacagaagtgtgctgtg
gccctttcagacgattccatcaagatctacaaccccaagaggttaagtctgtcgcaatgt
gctactactcccaccctgaagcaccgtctgcagcgcagtgtggcggctctgcagtggaag
cctctgtgtgcctctgccctggccgtcgcctgtcacaactgcctgcttgtctggcacgtg
gaccccacctcactctctaccaggccctcctccggctgtgcccaggtcctgtcccaccca
ggccattcccccgtcacgtccgtcgcatggtcacctaacggacctctcctggtgtcggcc
tctcccagggacactgccatgctggtgtgggacgtagctgttgagagctgtgtgcctctc
caccgcgtgggagggggaggagtcacctacctgtcctggtctcccgatggcagtcgcgtg
ctggcagctacgccctcctccctcttcagggtttgggaaaccaggatgtggacttgcgag
cggtggcccagtctgaaggggcgctgtcagtctggctgttggagtcctgatgggagtcgg
ctgctcttcagtgtgcaaggagagactgtcatctatgccctgaccttcactgacaaccca
ggggtgcccttaatgatgtcaggtgggccaaaggcagcaacagtggtggccgacctgtcc
gagaccaccttaaatacacctgacggagatatcacggtcggaggagagatccagtcgatg
gcgtgggatccgagaggcgagcgtctagccgtgctcgtcaaaggagacgctgaagcaggc
cgccctgccatgatcgcagtgttcaagactcaaatcagccccgcatttaagcttctgcca
tgtggttttgtccagggggaggccgggactgagcccagactgatgcagtttaaccccaac
taccagcatggagcccagctcactgtgtgttggtccaatgggaagattacccacgtgcct
ttctgctttatgagtgctgggaatccccagcctggcctgggaggcagcccatctgtaccc
ctgtcccagggcagaccagccgactacaacaaccagactctctacacagaactcatctcc
tga

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