Salvelinus namaycush (lake trout): 120059474
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Entry
120059474 CDS
T07522
Name
(RefSeq) aladin-like isoform X1
KO
K14320
aladin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120059474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120059474
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120059474
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
eIF2A
PD40
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
120059474
NCBI-ProteinID:
XP_038864482
UniProt:
A0A8U1C2J1
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Position
Sna14:36870553..36878030
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AA seq
520 aa
AA seq
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MMCSLALFPPPLSGDGETSQYNESNTDPSVWFGDSPALNLYFPRESLKPHSRPESSSKSA
FRDHCETLYTRSAGAWRDAGLSGLLNEIANSSAEVPKWLGVSSSCVLALLRWVSSFHSSL
FPHLTLSSEEMTVEFSQVLDWSDCAVRSFAWHPHTQKCAVALSDDSIKIYNPKRLSLSQC
ATTPTLKHRLQRSVAALQWKPLCASALAVACHNCLLVWHVDPTSLSTRPSSGCAQVLSHP
GHSPVTSVAWSPNGPLLVSASPRDTAMLVWDVAVESCVPLHRVGGGGVTYLSWSPDGSRV
LAATPSSLFRVWETRMWTCERWPSLKGRCQSGCWSPDGSRLLFSVQGETVIYALTFTDNP
GVPLMMSGGPKAATVVADLSETTLNTPDGDITVGGEIQSMAWDPRGERLAVLVKGDAEAG
RPAMIAVFKTQISPAFKLLPCGFVQGEAGTEPRLMQFNPNYQHGAQLTVCWSNGKITHVP
FCFMSAGNPQPGLGGSPSVPLSQGRPADYNNQTLYTELIS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgttctttggcactgttccccccaccgctgtccggcgatggagaaacttctcaa
tacaacgagtccaacacggatccatccgtctggtttggggattcacctgctctgaatctg
tacttcccgcgagagtcactgaagcctcacagccggccagagagcagcagcaagtcagct
tttagggaccactgtgagacgctgtacacaaggagtgcaggggcttggcgtgatgcaggc
ctgtctggactcctaaatgagatcgccaactccagtgcagaggtgcccaagtggctaggg
gtgagctcgagctgcgtcctggccttgctacgctgggtctcctccttccacagctctctg
tttcctcacctcacattgagcagcgaggaaatgaccgtcgagttttcccaagtgctggac
tggtcggactgtgcagtgcggagctttgcctggcacccacacacacagaagtgtgctgtg
gccctttcagacgattccatcaagatctacaaccccaagaggttaagtctgtcgcaatgt
gctactactcccaccctgaagcaccgtctgcagcgcagtgtggcggctctgcagtggaag
cctctgtgtgcctctgccctggccgtcgcctgtcacaactgcctgcttgtctggcacgtg
gaccccacctcactctctaccaggccctcctccggctgtgcccaggtcctgtcccaccca
ggccattcccccgtcacgtccgtcgcatggtcacctaacggacctctcctggtgtcggcc
tctcccagggacactgccatgctggtgtgggacgtagctgttgagagctgtgtgcctctc
caccgcgtgggagggggaggagtcacctacctgtcctggtctcccgatggcagtcgcgtg
ctggcagctacgccctcctccctcttcagggtttgggaaaccaggatgtggacttgcgag
cggtggcccagtctgaaggggcgctgtcagtctggctgttggagtcctgatgggagtcgg
ctgctcttcagtgtgcaaggagagactgtcatctatgccctgaccttcactgacaaccca
ggggtgcccttaatgatgtcaggtgggccaaaggcagcaacagtggtggccgacctgtcc
gagaccaccttaaatacacctgacggagatatcacggtcggaggagagatccagtcgatg
gcgtgggatccgagaggcgagcgtctagccgtgctcgtcaaaggagacgctgaagcaggc
cgccctgccatgatcgcagtgttcaagactcaaatcagccccgcatttaagcttctgcca
tgtggttttgtccagggggaggccgggactgagcccagactgatgcagtttaaccccaac
taccagcatggagcccagctcactgtgtgttggtccaatgggaagattacccacgtgcct
ttctgctttatgagtgctgggaatccccagcctggcctgggaggcagcccatctgtaccc
ctgtcccagggcagaccagccgactacaacaaccagactctctacacagaactcatctcc
tga
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