KEGG   Salvelinus namaycush (lake trout): 120059511
Entry
120059511         CDS       T07522                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120059511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120059511
   03400 DNA repair and recombination proteins [BR:snh03400]
    120059511
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    120059511
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     120059511
SSDB
Motif
Pfam: MBD HhH-GPD
Other DBs
NCBI-GeneID: 120059511
NCBI-ProteinID: XP_038864556
UniProt: A0A8U1EVJ6
LinkDB
Position
14:complement(40157207..40160788)
AA seq 516 aa
MAVPGSDMIVTKEADPNAVKRQRTRQEDAESCQPSGMPLGWVRVVRQRKSGKTAGKLDIY
ITSPQGQRFRSRASLQAFLLNDAGGDLQIDDFDFPKAKSGSVAVTPLPSQERQRKVHQEH
TRHTSEANIKEDWQNTEENMEEGRILSRPPNNTKIASSAKSCKQRTRPRDKRTISTHQRP
GMPPLARGNHRRAAGRGTETGHPSDTNEDIKETNIQASVRRGEDDETERRPKVVAVVDDV
IPEKSPQRRPGLLREKLLRLVPPTDLQDALIGREEQLPVPLLLVPVLRVQSASESEGEAE
SEGVGVGETEGVEDIEAEVHDEELPSPQTTGGRCTPLKDSQSKLLGEKRKTSPYFSRKSM
RDGLSPPRRKALRKWTPPRSPFHLVQETLFHDPWKLLVATVFLNKTSGKMAIPVLWQFFK
LYPSAEETRGAEWKPLSVLLRSLGLYELRAKIIIRFSDEYLTKQWRYPIELHGIGKYGND
SYRIFCVEEWRQVEPQDHMLNKYHAWLWENHERLGI
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggctgttccaggttcagatatgatagttaccaaagaggctgatcccaatgcagtcaag
agacagcggaccagacaggaggatgcagagtcgtgccagccttctggtatgccgctaggc
tgggtgagagtggtgaggcagaggaaaagtgggaagactgcaggcaaactggacatctat
ataacaagtccccagggacagaggttccggtccagggcgtctcttcaagccttccttctc
aacgatgcaggaggggatctacagatagatgactttgacttccccaaagccaagagtggc
agtgtagctgtgactccgctgccaagccaggagagacagaggaaagttcatcaggaacac
acacgtcatacctcagaggccaatatcaaagaagactggcagaacacagaggagaacatg
gaagagggtagaatattaagccggcctccgaataacacaaaaatagcctcttccgcaaaa
tcctgcaagcagaggaccagacccagagacaagagaacgatatcaactcatcagaggcct
ggcatgcctcccttggcaaggggaaaccacagacgggcagctgggagaggcacagaaacg
ggccacccatcagacacaaacgaagacatcaaagagacaaacatacaagcctctgtgaga
aggggtgaggatgatgagactgagaggcgtccgaaggttgtggcggtagttgacgatgtc
ataccggagaagagcccccagaggaggccggggctgctgagagaaaagctgctcaggctg
gtcccgcccactgatctacaagatgctctcattggtcgagaagaacagcttcctgtgcca
ctgttactcgtcccagtccttagggtgcagtctgcttctgagagcgagggggaggctgag
tctgagggtgtgggagtgggggagactgagggagtggaggatatagaggcagaggtgcat
gacgaagagctgccatctccccagaccactggagggcgctgtacaccactgaaagattcc
cagagcaaactgttaggagagaaacggaagaccagtccttatttcagccggaagtcaatg
agagatggtctgagcccccccaggaggaaagccttaaggaagtggacccctcctcgctcc
cccttccacctggtgcaggagacccttttccacgacccctggaaactcctggtagccacc
gtgttcctcaacaaaaccagcggtaaaatggccatcccggtgttgtggcagttctttaag
ctttacccatcagcggaggagaccaggggggcagagtggaagcccctgtctgtgctgctg
aggtctttgggcctgtatgaactgcgagccaaaatcatcatcaggttctctgatgaatac
ctgaccaagcagtggcgctaccctatagagctgcatgggattgggaagtacggcaatgac
tcctacaggatcttctgtgtagaggagtggagacaggttgaaccccaggaccatatgctg
aacaagtaccatgcttggctgtgggagaaccacgagaggttgggaatctga

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