Salvelinus namaycush (lake trout): 120059584
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Entry
120059584 CDS
T07522
Name
(RefSeq) rho guanine nucleotide exchange factor 25-like
KO
K20690
Rho guanine nucleotide exchange factor 25
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120059584
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120059584
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3-RhoG_link
PH
PH_19
PH_10
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
120059584
NCBI-ProteinID:
XP_038864643
UniProt:
A0A8U1ERW5
LinkDB
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Position
Sna14:7187614..7266559
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AA seq
742 aa
AA seq
DB search
MDGYRNFAENSDVAAEPAVSQKGEEGVAGSGSGPAQWKSAGLEDWEQGSSSQDTLECKEG
RDRTDSYSAAGSEGSISTSVASLPPTLTVSCSSAPSSPGSRRSVSTLKKWLTNPVRKLSA
GAVNISASSKGERQVRKLDGGSKSPPPIPPSRHSHDLGLGGLGRPLGSEDHLTTILPITH
NEMECRYRLASPEELSSATLNSPSYLADSLQGCTALANTQDIQSTNVCPDDNVSVLMENT
PSQSSAAADSEEERRSALEKSMYVLKELLETEKLYVEDLGRIVEGYMVTMTTKGIPDDMK
GKDKIVFGNIHQIFDWHKDYFMGELEKCIAEPERLAQLFIKHERRLHMYVVYCQNKPKSE
HIVSEYIETYFQELRQHLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYTKAGMDTEELE
KAVEVMCFVPKRCNDMMNVGRLQGFEGKITAQGKLLQQDTFTVMEQDSSFLSRAKERRVF
LFEQLVIFSEPIDRKKGFSLPGYTFKSSIKVSCLGVEVPVEADCLVLTSRGTDGSVVRYV
LQTTSPEVCRAWVDDVGQILETQKNFLNALQSPIEYQRRESNSKSNSLGRSMRAPLSAAS
GPLRPHSSASIDRQRLPCLLSYNTSLPILYLPSQGGTCPQRPGETNTPQESPLVSRNSQT
TASQSHIQLAFTDQSGLSHYSRTQTPLQCQAVSNGLYSTQRAGEGCRSRVLPGEAGPPPV
SIPGPSAGRRSSNLAQLNEDDL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggacggttaccggaattttgcagagaacagtgacgtagcagcagagcccgcagtgagc
cagaagggagaagagggggtagcaggttcaggttcaggtccagcacagtggaaatcggct
gggctagaggactgggagcaggggtcctcctcccaagacacccttgagtgcaaagaagga
cgagacagaacagactcatactcagcggcaggcagcgagggtagcatctccacctccgtg
gcgtccctgcctccgaccctgacggtgtcctgtagctccgcacccagctccccaggctcg
cgacgttccgtaagcaccttgaagaagtggctgaccaatccagtccgcaagctcagcgct
ggggccgtcaacatctcagccagctccaagggggagcggcaggtcaggaagttggatggg
ggaagcaaatcccctcctcctattcccccctctaggcacagtcatgacctgggcctggga
gggcttggcagacccctaggatcagaggaccacctcaccaccatactacccatcacacac
aacgagatggagtgcaggtataggttggccagtcctgaggagctttcctcagcaacccta
aactctcccagctacctggctgactcactacagggctgtactgcacttgccaacacacag
gatattcagtccaccaatgtctgtccagatgacaacgtctcagtattgatggaaaacacc
cccagccaatcatcagcggcggctgacagtgaggaggagaggaggagtgccttagagaag
agcatgtacgtactgaaggaactcctagagacagagaaactgtatgtggaagacctgggg
cgcatagtagagggctacatggtcactatgactactaaaggtataccagacgacatgaag
ggaaaagacaagatcgtgttcggaaatattcatcaaattttcgactggcataaagactac
ttcatgggcgagctggagaaatgtatagcagaaccagagagactggcccaacttttcata
aagcatgagaggcgtctccacatgtacgtggtttattgtcagaataaacccaagtcggaa
cacattgtctctgagtacatcgagacctacttccaggaactgagacaacatctgggtcac
agactacaactcaacgacctgctgatcaaaccagtccagaggatcatgaagtaccagctg
ctgctcaaggacttcctcaagtattacaccaaagctgggatggacacagaagagctggag
aaagcggtagaggtgatgtgctttgtgcccaaacgctgcaatgacatgatgaacgtggga
cgcttgcagggctttgagggtaagatcacagcgcaggggaagctgctccagcaggacacc
ttcacagtgatggaacaggacagcagctttctgtcccgagccaaggagaggcgggtcttc
ctgttcgaacagctggtcatcttcagcgagccaatcgacaggaagaaagggttctcactt
cctggttacaccttcaagagcagcatcaaggtgagctgtctgggggtggaggttccagtg
gaggcggactgcctggtgctgacgtcacggggaactgatgggagcgtggtacgctatgtg
ctgcagaccacctccccagaggtctgcagggcctgggtcgatgatgtgggacagatcctg
gagacccagaagaacttcctcaatgccctccagtctcccattgagtaccagcggagggag
agtaacagcaagtccaacagcctgggccggagcatgagagcccccctgtctgcggccagc
ggccccctgcgcccccactcttcagcctccatcgaccgccagcgcctgccctgcctcctg
tcgtacaacacctccctccccatcctctacctgcccagccaggggggaacctgcccccag
agacctggcgaaacaaacacaccccaggagtctcctctggtcagtaggaactcccagaca
acagcctctcagtctcacatccagctagccttcaccgaccagtctggcctgtctcactac
tccaggacccaaacccccctgcagtgccaagctgtgtccaacgggctgtatagcacacag
agagcaggagagggctgccgtagcagagtgctgcctggtgaggctggacctcctcctgta
tccatccctggtccctcggctggccggcgctccagcaacctggcccagctcaatgaagat
gacctatga
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