Salvelinus namaycush (lake trout): 120059607
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Entry
120059607 CDS
T07522
Name
(RefSeq) zinc finger and BTB domain-containing protein 39-like
KO
K10511
zinc finger and BTB domain-containing protein 39
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120059607
04121 Ubiquitin system [BR:
snh04121
]
120059607
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
120059607
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120059607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-met
zf-C2H2_ZNF462_1st
zf-C2H2_jaz
Herpes_DNAp_acc
NapB
Motif
Other DBs
NCBI-GeneID:
120059607
NCBI-ProteinID:
XP_038864664
UniProt:
A0A8U1C9E5
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All DBs
Position
Sna14:complement(11233396..11237121)
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AA seq
853 aa
AA seq
DB search
MRIRLQGSGHAAGLLAELNHCRLSRLFCDVILQVGSRAFAVHRAVLACAGTHFRSLFSGR
GTQIVTSGAGATTTYTLDFVSPANFEKVLTFIYTGEIFTDLIDVGVLYELAERLGVRELV
RACHATFPDLQQPGSGSADCVVDGDLDPDMVAAAAAGSSVCSSSAASCSSLSSSAGPSAA
PTPAAAPSPLPQGSRVARLGRGGGHTAPLSLSLKAEDVQSHLGYGQMAEDKRLQLTGDQQ
SSVDMSTVAVGATPGPPLQLKTEEVVVGDGVGNSEEEQMVVSGSRAGSVPPCVSDSCSYP
DSSAQLGGDICGVREASMSSSGDPLDSLQMGVVEAGVGGVSSDHAGVIFGGEDDEDDDEE
NEEEREHLQGDEEGTDGGVDQWRQLAGEIIELSDGENYMEEEDEEEDEDEDLVCVENRAA
VSAGGVNTGQVSSVQGIMACKACGMALLADSASLRAHAETHLSETGACRVCGASFPGDRG
ASITHALSHVVFSCDMCHLQFNSQAKLVRHRRQAAARYTLPSQLHNATQGHNGELQCAVC
NKALTKDFQVIRDHLLSHVSIQSLSCGVCQLPQPSLCALLWHALTHLSLPVYSCPLCACG
FLDRPLLDRHMFLHAEEAATDREAMRAHKAAGPEGEEELRCFLCPQTFRSASAFQYHLSF
HTNEAQGSQGWAGKRKADQIEYPSSCSSSSPLEAGSLGKLGNMGFGLGSFSLSDKLLQGA
VAAGFPTGLLSNGNSMGGTIPREKWYRCRFCGKRFAHSGEFTYHLRIHTGEKPYQCKVCL
RFFRGRSTMICHLKTHAGALMYRCTICGLYFSTLKLVSSHMDVHKDHLPPDFNIEQTFMY
NDHSKEPLPALDT
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaggattcggctgcagggctcaggccacgccgctggccttctcgccgaactcaaccac
tgccgtctgtctcgcctcttctgtgatgtcatcctccaggtggggagccgcgcctttgca
gtgcaccgcgccgtgctcgcgtgcgccggaacccacttccgcagcctgttctcgggcagg
gggacccagatcgtaacctcaggagccggagccacgacaacgtacactctggattttgtg
tccccggccaattttgagaaggtgctgactttcatctacacgggagagatcttcacagac
ctgatagatgtaggagtgctgtatgagctggcagagaggctgggggtgagagagctggtg
agggcctgtcacgctaccttccctgacctgcagcaaccgggctctggctctgcagactgt
gtggtggatggagacctggaccctgacatggttgcagctgctgctgctgggtcatccgtg
tgctcgtcctctgcagcgtcttgttcctccctgtcatcatctgctggtccctcggctgct
cctactccagcggcggccccctcacctctcccccagggcagcagggtggccaggctgggc
cggggtggtggacacacagcccctctgtccctgtccctcaaagcagaggacgtccagtct
cacctgggctatggacagatggccgaagacaaacggctacagctgacaggagatcagcag
agttcagtagacatgtccactgtagctgtgggggctacacctggacctcccctgcagctg
aagactgaggaggtggtggtgggagacggggttggtaacagtgaggaagaacagatggta
gttagtgggagtagggctggttctgtacctccatgtgtgtctgactcctgctcctaccct
gactcgtcagcccagctgggaggggacatctgtggggtgagggaggcctccatgtcctcc
tctggagaccccctggacagcctgcagatgggagtggtggaggctggggtgggaggggtg
agctctgaccacgcaggggtcatctttgggggggaggatgatgaagacgatgatgaagag
aacgaggaagagagagagcatctgcagggagatgaagaagggactgatggaggagtggac
cagtggagacagctggctggagagatcatcgagttgagcgatggcgagaactacatggag
gaggaagatgaggaggaggatgaagacgaggacttggtgtgtgtggagaacagagcagcg
gtcagtgcaggaggtgtgaacactggccaggtgtcgtcggtgcagggtataatggcgtgt
aaagcctgtggaatggcactgttggcagactccgcttccctgagggcccacgcagagacc
cacctctctgagacaggggcctgcagggtgtgtggggcatctttccccggagaccgtggc
gccagcatcacccacgccctgtcccatgtggtgttctcttgtgacatgtgtcatctccag
ttcaacagccaggccaagttggtacgccaccggcgccaagctgcagccaggtacaccctc
cccagtcagctccacaacgccacccaggggcacaacggggagctgcagtgtgctgtctgt
aacaaagccctcaccaaggacttccaggtcatcagggatcacctgcttagtcacgtgtct
atccagtcactgagctgcggtgtgtgccagctgccccagccctccctgtgtgccctgctg
tggcacgccctcacccacctctccctgccagtctactcatgcccgctctgcgcctgcggc
ttcctagatcgccctctgctggacagacacatgttcctgcatgctgaggaggccgccact
gacagagaggccatgagggctcataaagcagccggaccagagggagaggaggagctgcgt
tgcttcttatgcccacagaccttccgctccgcctcagccttccagtaccacctgagcttt
cacaccaacgaggcccagggcagccaggggtgggcagggaaacgaaaggctgaccagata
gagtacccttcctcttgctcctcctcctcccccctggaggcaggcagcctggggaagctg
ggcaacatgggcttcggcctgggctccttcagcctctcagacaagctgctccagggggcc
gtggcggctggctttcccacgggcctcctgtccaatgggaactccatgggtggcaccatc
ccccgggagaaatggtaccgctgtcgcttctgtggcaaacgctttgcccactctggcgag
ttcacctaccacttgcgcatccacactggggagaagccgtaccagtgcaaggtgtgcctg
aggttcttccgagggcgctccactatgatctgccacctgaagacccacgccggggcactc
atgtaccgctgcaccatttgcggcctctacttttccacgctcaagctggtgtcctcccac
atggacgtccacaaagaccacctgcctccagacttcaacatagagcagaccttcatgtac
aacgaccactccaaagaacccctccccgccctggacacctga
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