Salvelinus namaycush (lake trout): 120059617
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Entry
120059617 CDS
T07522
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120059617
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120059617
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
CD45
Motif
Other DBs
NCBI-GeneID:
120059617
NCBI-ProteinID:
XP_038864672
UniProt:
A0A8U1EUR3
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Position
Sna14:complement(12867779..12869250)
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AA seq
287 aa
AA seq
DB search
MPASQTGNFFERNINMPPGYQIPFLGGPAGNNSFDLKAVSPYHQALLGRGGPFYPQYRPG
ATDDLIRVAKVATRESTSALKAWLNEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANAR
RRLKKDNRVNWASKGKSDEEGESDEEEGEGSLQKIRLDDEDEIDPPTVDDNEDIGHRVSN
STTEPVDERLVKQSNDDNRAGRLAAHAENVVKNDTERKSFPANLESKDNVECQKPKIWSL
AETATSETGKKPQYTACHPGTQVGKFWAEWASRNGLYIPVYPAHDIL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgtcacaaacaggcaacttctttgagagaaatatcaacatgccccctggatat
cagataccgtttttgggaggtccagctgggaacaactctttcgacctgaaagctgtctct
ccatatcatcaagcgctcctcggccgaggaggtccattctacccgcaataccgaccagga
gcaaccgatgacctgatcagagtcgccaaggtggctacccgggaaagcaccagcgcgctc
aaggcctggttgaacgagcatcttaagaacccgtatcccacgaagggtgagaagatcatg
cttgctattgtaaccaagatgagcctcacgcaggtttccacttggtttgccaacgccagg
cgacgactgaagaaggataatagggtaaactgggcgtccaaggggaaatctgacgaggag
ggcgagagcgacgaggaggagggcgagggctctctgcagaaaatccgtttggacgacgaa
gatgagatagatcctccaaccgtagatgacaatgaggatattggacatagagtatccaac
tcaacgacagagccggtggatgagcgccttgtgaaacagtcaaacgacgacaatagagct
ggtaggctcgcggcgcacgcggaaaatgtggtaaagaatgacacagaacgcaaatcattt
ccagctaatctggaaagtaaagataacgttgagtgtcaaaaacccaaaatatggtctttg
gcagaaacggcgacatcggaaacggggaaaaagccgcagtacactgcttgtcatcctgga
acacaagttggcaaattctgggcagaatgggcatcaaggaacggactgtacattcccgta
taccctgctcacgatattctataa
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