Salvelinus namaycush (lake trout): 120059626
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Entry
120059626 CDS
T07522
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X1
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
snh
Salvelinus namaycush (lake trout)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
Ig_2
ig
LRR_4
LRR_5
LRR_1
V-set
LRR_9
C2-set_2
LRR_14
C2-set_3
C1-set
LRRCT
LRR_6
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
120059626
NCBI-ProteinID:
XP_038864682
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Position
Sna2:complement(17710141..17726905)
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AA seq
1109 aa
AA seq
DB search
MAEGWPIPPALLLLSLSACWALDSCPAPCSCPRGSDEIQILDCNRKRLSAAPLDPPHGIT
HLTMNHNDLTTVPYLGEVTPNITTLSLVHNRISELWMHQLHPYISLETLDLSSNSISEIK
AGAFPPMQLKYLNLSNNKISVLEPGCFDNISSSLLVLKLNRNRITLLPYKVFRLPQLQFL
ELKRNKIKMVDSLTFKGMDLLKSLKMQRNGITKLMDGAFFGLNNMEELELEHNNLTEVNK
GWLYGLHMLHVLRVNQNTISIIRPDAWEFCQKLEELDLSFNHLTRLEETAFIGLGLLENL
NLGENTISHLGEGVFSSLANLRSLDIRNNEISWAIEDSIGVFVGMKKLNTLILQRNKIKS
ITKEAFESLEELEHLDLSKNGIMSIHPDSLSHMNLKVFFLNTSSLLCDCQLQWLGPWLTD
NRFLQSVSAMCAHPASLLGRNVLSVSLEELVCDDFPKPRITDHPETATALRGNNVTLSCL
ASSSSDSPMATAWRKDGEVLYDAEVQNYARYQEGKLFYTTVLHLLNVNFTDEGRYQCVVS
NHFGSNYSNRAKLTVNELPSFLKTPMDLTIRTGTMARLECAAEGHPSPQIAWQKDGGTDF
PAARERRMHVMPDDDIFFIANVKTEDMGVYSCTAQNAAGSLSANATLTVLETPSFMRPLK
DRAVARGETAVLQCIAGGSPAPRLNWTKDDGPLVLTERHFFAAANQLLIIVYAGSADTGK
YTCIMSNTLGTERGHIYLSVLPSPNCDTAGGYDQDSWNTVGIVVIVVVCCVVGTSLVWVI
VIYHMRRKSEDYSITNSDEMNLPVDIPSYLSSQGTLSEPQEGYSNSEAGSHQQLLPPLSN
GYVHKGTGYVHKGTGYVHKGTGYVHKGTGYVHKGTGYVHKGTDGVCYSDTGSEVDTEANG
MLHCRVGSLFTGQSSFHPGQPCEGLAGVSTGGAGPLVICSDCYDNANMYSRTREYYACLA
EDDPLDKGLSGIIAHLPKEPYGEQRGQHEDTALESLINNQDSSVFLTSHNSSVFLTKRLS
KALWPPEQHYSTDVPPRSFWGEGEDLSTVPQPGLSQQPVTLHPTPYASSVAEGGEERSVE
VELSLPQSTQYHRSASYRTTSQEHIQAPT
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggctggcccatccccccggccctcttgttgttgagtttgagtgcctgctgg
gcactggattcctgccctgctccatgctcttgtccaagggggtcagacgaaatccaaatc
ctggattgcaataggaaaaggttgtcagcggcccccctggatccacctcatgggataact
catctcactatgaatcataatgatctgacaactgttccataccttggagaagttacccca
aacatcacaacactctcattggtccacaaccggatctcggagctgtggatgcatcagctg
catccatacatctccttggagacacttgacctgtcatctaactccatctcagagatcaag
gctggagccttcccacccatgcagctgaaatacttgaatttaagcaataacaagatcagt
gtccttgaacctggctgctttgacaacatctccagctccctgctggttctgaagctgaac
aggaacagaataacactgctaccatacaaagtgttcaggcttccccagctgcagttcctg
gaattaaagcgcaacaagatcaagatggtggacagcctgaccttcaaagggatggactta
ctgaaatcactgaagatgcagcggaatggcatcacaaagctgatggatggcgctttcttt
gggctcaacaacatggaggagctagagctggagcacaacaatttgacggaggtcaacaaa
ggctggctgtatggcctgcacatgctgcatgttctgcgggtcaaccagaacaccatcagc
atcatcagaccagacgcctgggagttctgccaaaagctggaggagctagatctgtccttc
aaccacctcacccggttggaggagaccgcgttcattggactgggccttctggagaacctg
aacctaggagagaataccatcagccacctgggagagggagtcttcagcagtctggccaat
ctgcgctcactagacatacggaataatgagatctcttgggccattgaggattccattggt
gtgtttgttggaatgaagaagctgaacacattgattctacagcggaacaagattaaatct
atcacaaaggaagcctttgagagtctggaggaactagagcacttggacctgagcaagaat
gggatcatgtccatccaccctgattcgttgtctcacatgaacttaaaagtgttttttctg
aacactagcagcctgctgtgtgactgccaactgcaatggctgggtccatggttgactgac
aaccgcttcctgcagtctgtctccgctatgtgtgctcaccctgccagcctgctgggccgt
aacgtcctgtctgtcagcctggaggagctggtctgtgatgacttcccaaagccccggatc
actgaccaccctgagaccgccaccgccctgcgtgggaacaatgtgactctgagctgcctg
gcttcaagcagcagtgactcccccatggccacggcctggaggaaggacggggaggtgctg
tacgatgcagaggtgcagaattacgcccgctaccaggagggaaagctgttctacaccacc
gtgctgcatctcctcaacgtcaacttcacagacgagggacgctaccagtgtgttgtctcg
aaccactttggctctaactactccaacagggccaagctcacagtcaatgagctgccgtcc
tttctgaagactccgatggacctgaccatccgcacgggcaccatggccaggctggagtgt
gctgccgagggtcacccatccccccagatcgcctggcagaaagacgggggcacagacttc
cctgctgcccgggagagaaggatgcacgtcatgccagacgatgacatcttcttcattgcc
aatgtaaagacggaggatatgggggtgtacagctgcacagcccagaacgctgcagggagc
ctgtctgccaacgctacactcactgtgctagaaactccgtccttcatgcgtcccctgaag
gacagggcggtagctcgtggggagacggcagtgctccagtgtatcgcaggcggaagccca
gcaccccgcctcaactggaccaaggatgacgggcccctggtcctcaccgagcgacacttc
ttcgccgccgccaaccagctcctcatcatcgtgtacgcggggtcggcggacacagggaag
tacacgtgcatcatgtccaacacgctgggcacggagcgcggccacatctacctcagcgtg
ttaccctctcccaactgtgacactgcgggcggctacgaccaggatagctggaacacggtg
ggcatcgttgtgatcgtggtggtctgctgcgtggtgggcacctcgctagtctgggtcatc
gtcatctaccacatgcgaaggaagagcgaggactacagcatcaccaactcagacgagatg
aacctgccggtagacatccccagctacctgtcctctcagggaacgctgtctgagcctcag
gagggatacagcaactctgaagcagggagccaccagcagctcttgccaccactgtccaac
ggctacgtccacaagggaactggctacgtccacaagggaactggctacgtccacaaggga
actggctacgtccacaagggaactggctacgtccacaagggaactggctacgtccacaag
ggaactgacggtgtgtgctacagtgacacaggcagcgaggtggacaccgaggccaacggg
atgctgcactgccgtgtgggctctctgttcacgggacaaagcagcttccatcctgggcag
ccctgcgagggactggctggggtgtcgacaggtggtgcagggccgctggtcatctgctcg
gactgctacgacaacgctaacatgtactctcggacccgggagtactatgcctgcctggcc
gaggatgaccccctggacaagggtctctctggcatcatagcccaccttcccaaggagccc
tatggggagcagcgaggccagcatgaggacacagccctggagagcctcatcaacaaccag
gactcctcagtcttcctcaccagccacaactcctcagtcttcctcaccaagaggctgagc
aaagccctctggcccccagaacaacactacagcaccgatgttccccccaggtcgttttgg
ggcgaaggggaggacttgtctacagtgccccaaccaggtctgtcacagcagccagtgacg
ctgcacccaactccctatgcatcttcagttgctgagggaggggaggagaggagtgtggag
gtggagctctcccttccccagagcacacagtaccacagaagtgcctcttataggactacg
tctcaggagcacatccaagcccccacataa
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