Salvelinus namaycush (lake trout): 120059630
Help
Entry
120059630 CDS
T07522
Name
(RefSeq) rho guanine nucleotide exchange factor 40-like
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120059630
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
120059630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
IQ_SEC7_PH
KLRAQ
PH_19
Motif
Other DBs
NCBI-GeneID:
120059630
NCBI-ProteinID:
XP_038864683
UniProt:
A0A8U1C887
LinkDB
All DBs
Position
Sna14:complement(15415143..15566760)
Genome browser
AA seq
1775 aa
AA seq
DB search
MATSEMAVNAMELTASLTFWVVTGLRNPESLDRSIQNTLSVLYPPFEATAPTVLSQLFQV
IEERYQGDALKCLLDFLITAKHILESVQQAACAQYSDVVFRCEGWPLCLHEKVVIQLASI
NPLLLRPGDFYLQVAPFSEQSARIVVRSLLGEEEGQGREVEETPIPETSYPCIFTEDWLG
ELNHGRHGTLLSHCILSTDQGMVKVPWAQVALPEFVDKPRTMALSSPNPAATQQEKVARP
GPSLALSPPASGYSVETRISPAKHGIAVSLCLVDSNCSRLVKVDQDRPVVKPIGWVSPNT
WDSRSNNTSEVEGEYIDLVEFTKQKEALLSGAHSHTHPRAPIFRLVTLNRPGVPPAPALP
PPPALAPAPHRPLREPLHCGRTVRLPEDPPCTPCMRRRMGQVSKAEEIRCRYRESYHSAL
QNPVTIERDNRLNTLAVLEEASPCEGRLGPEGKELCPGPSQQCYYPDPGHHDQTPPVSTV
PCWKSGENVSQAGQPSIPVTNGHQTPPLEITQQPLGHYAVPSSKVLLPASAEPSTHHLQM
GVACLTGGRDRTGRLVVEVYGDKEGWRSPLVSSLELSKLLLYLHSIIRRELRELGMTLVI
DARKTPPPPQFNKALLVVQEQIPHAIHSVLILVEKESCHRTEKCPRLQIAVVTSLKGLHK
LVEGSQLSSGLEGTLPYNHINWLQLHQKLHPFMSDLQEASGLLLTAIRKLEEGRKIDTVQ
DVQRCILEQRTLMKDVLEDRQLVALQREGGAMLARLRRESDLRYSHCEDYSDAVDSVTCM
YNHVEEQAHVLVHRSNMSLEHLEYLLQLREMEGHFSKIREWFDAEGERRLLEAESVEDSR
ERVEQTLRSFSAFLTKANEQKHKVMALVTEAEKIQGPSPYPETEVFRTMVCTFKSGLADF
LSRAEKCCSELETMVTVCNFCEQATELAKDCRQYLDQVVRRPETDDVSTLQKYQESFVQF
SSELFQEVKAQACALRGSRGMRVWNVAWLKCQEVRHQLEERLQDVERALRNTGPWHEQLR
AGEDEALVHTVTHHDGALVLPRPGPPHWYNPPSGSMMGRYHGALESRNNSVTCCNINFKP
ENNRPCKRSKTTTMPASPHIRSIRRAEREPRGREACQGRSREAATLADSHTVGCEWFPWQ
RGGLGRSMSEDSCATATSSQSESCVQTPSCSHGKPSCRILQAAQKFQISRHGSFCSEESC
SVQEGAERTSSRNTSPSVRRCEGTTSLASSEEKAGNIMKLQRIMAELLLTEREYVRSLGY
ILTHYLPLLERPDVPQDLRGKRGVIFGNLEKLYDFHGHFFLRELDACQTEPLQVARCFLR
HRDSLGLYALYSKNKPQSDALILHHRPDIFKRKQQELGDHMDLSSYLLRPIQRISKYSLL
LQDMLGMCAPQRDREELQAAADVVRFQMRHGNDLLTMDAIQDCDVNLKEQGQLIRQDEFI
VFFRNKKCSRRIFLFQDLILFSKTKKTNVGNDVYIYKQSFKTSDIGMTHNSGESGFCFEI
WFRRRKFQDTYTLKADRAEVKSAWTRDLEQILWEQAAYSRELRIQERVFMGTGRKPFMDI
QPNEAAICDRAVNWDRAGVGDRAANCVLLGRAPVPSFPQTDLECLRPNSIGSGSSVSTSC
SHSSSSSGRGSLPPVGYPGNQIQGGKTNHIVYSSPETVTVTEDDLNNHHNHQKQNLHLLM
DSMESSGESGSVFSSSECSCLSAIGGEVEDSSSVTSQSSQSCVTQRTGAPNLRKNSSPAM
IRKKPSIAPKPPALAAPQSLQKGKKMVAIGKSTEV
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagtgagatggcagtcaatgccatggagctcactgcctccttgaccttttgg
gtggtgacagggctaaggaaccctgagtctttagacaggtccatccagaacaccctctca
gtcctctaccctcccttcgaggccacagcccccaccgtcctgagccagctcttccaggtc
atagaggaacgttaccaaggagatgcactcaagtgtctgctggacttcctcattacagcc
aaacacatccttgagagtgttcagcaggctgcctgtgcccagtactctgatgtggtgttc
cgctgtgagggctggcctctgtgtctgcatgagaaggtggtgatccagcttgcctccatc
aaccccctattgctgcgcccaggggacttctacctgcaggtggcacccttctctgaacag
tccgcccgcattgtggtccggagcctgctgggggaggaggagggacagggtcgggaggta
gaggagacacccatccctgagacctcctacccctgcatcttcactgaggactggctgggg
gagctcaaccatggccgccatggcacccttctcagccactgtatcctctccacagaccag
ggcatggtgaaggtgccatgggcacaggtggctctacctgagtttgtggataaacccaga
actatggccttgtcatctcctaaccctgctgctactcaacaggagaaagtggcaaggcca
gggccctcgttggcgctgtctccccctgcctctgggtactctgtggagactaggatctct
cctgctaaacatggcattgcggtgtcactgtgtctggtggacagtaactgctccaggctg
gttaaggtggatcaggataggcctgtggttaagcccattggctgggtgtctcccaacaca
tgggacagccgcagcaacaacacctctgaagttgagggggaatacatagacttggtggag
ttcactaagcagaaagaagcgttgctcagtggggctcacagtcacacacaccccagagca
cccatatttaggcttgtcaccctcaacaggcctggtgttcctccggctccagccctgccc
ccgcccccggccttggctccagccccccaccggcccctcagggaaccgttacactgtggc
cggaccgtccgactccccgaagacccaccctgcaccccttgcatgaggaggagaatgggc
caggtgtccaaagcagaggagatcaggtgccggtacagagagtcttaccattcagcactg
cagaaccctgttaccattgagagagacaatagactaaacacactggcggttctggaggag
gctagtccatgtgaggggaggctgggaccagagggtaaagaattatgtcctggtccctcc
cagcagtgctactatccagacccaggtcaccatgaccagactccccctgttagcacggtt
ccctgttggaagtctggagaaaatgtctcccaggctggccaaccctccatacccgttaca
aacggacaccagacccctccacttgaaattacccagcagcccctgggtcactatgctgtg
cccagttctaaggtcctgttaccagcctcagcagaacccagcactcaccatctccagatg
ggagtcgcatgtctaactggtggcagagacaggacaggtcggttggtggttgaggtctac
ggagacaaggaaggatggagatctcctttagtgtctagtctggaactcagcaaactgctg
ctctacctccactccataatcaggcgagaactaagagaacttggaatgacactagttatt
gatgctcggaagactccacctccaccacagttcaataaggccttgttggtggttcaggag
cagattccccatgcaatacacagtgtcttgatcctagtggagaaggagagctgccatcgc
acagagaaatgtcctagactacagattgctgtggtgacctcactgaaggggttgcacaag
ctggtggaggggagccagctgagctcaggcctagagggcacccttccctacaaccacatt
aactggctgcagctccatcagaaacttcatccctttatgtcagatctccaagaggcctca
ggtttgctactaacggccatcaggaaactagaggaaggccgtaagattgacacagtgcag
gatgtacagaggtgtattctagaacagagaactctgatgaaggatgttctggaggacaga
cagttggtcgctttgcaaagggagggaggagccatgctggctagactgagaagggagagt
gacctcagatactctcactgtgaggattacagtgatgcagtggattctgtgacctgcatg
tacaaccatgtagaggagcaggcccatgtgctggtgcacagatccaacatgtccctggag
caccttgaatacctgctccaactcagagaaatggagggccacttctctaagatcagggaa
tggtttgatgcagaaggggaacggcggttgttggaggcagaatccgtggaggactctaga
gaaagagtggagcagactctccgtagtttcagtgcattcctcactaaagccaatgagcag
aagcacaaggttatggccctggtgacggaggcagagaagatccagggcccatctccatac
cctgagactgaggtgttcaggaccatggtctgcaccttcaaatctggcctggctgacttc
ctctcccgggcagagaagtgctgtagtgagctggagactatggtcactgtgtgcaacttc
tgtgagcaggctactgagctggccaaagactgcagacaatacctggaccaggttgtcaga
cgcccagagacagatgatgtctctacactgcagaagtaccaggagagctttgtccagttc
tcctcagagctcttccaggaggtgaaggcccaggcgtgtgctttgaggggctccaggggc
atgcgggtgtggaacgtagcgtggctaaagtgtcaggaggtcaggcatcagctagaggag
agactgcaggatgtggagagggccttgcggaacacaggcccctggcatgaacaacttaga
gctggtgaggatgaggccttggttcatacagtgactcatcatgatggggctctggtactg
cccagacctggtccaccacactggtacaatcctccatcaggctctatgatgggaaggtat
cacggggccttggagagcaggaacaactctgtgacctgctgtaatataaacttcaagcct
gagaataacagaccttgtaaacggtcaaagaccaccaccatgccggcctctccccatatc
agatccattaggagagcggagagagagcccagagggagagaggcctgccaagggaggagc
agagaggccgccacccttgccgactcgcacactgtgggctgtgagtggttcccgtggcaa
cgcgggggcctgggccggtccatgagcgaggactcgtgtgcgaccgccacgtccagtcag
tctgagtcttgcgtccagacaccttcctgctcccatgggaaaccctcctgtcggatcctg
caggccgctcagaagttccagatctcacggcatggcagcttctgctcagaggaatcctgt
agtgtccaagagggggcagagaggacctcttcaaggaatactagcccatcagtgaggagg
tgtgagggaacaacatcattggcaagttcagaggagaaggctggcaatattatgaagctg
cagcggatcatggcagagctactgttaacagagagggagtatgtgcgctccctgggttac
atcctgactcattacctccccctgctggagaggcctgacgtgccacaagacctgcggggc
aaacgtggagtcatctttgggaacctggagaagctgtatgacttccacggccatttcttc
ctcagagagctggatgcctgtcagacagagcctttacaagtggctcgctgcttcctgaga
cacagagacagtttaggcctctatgctctctacagcaagaacaagcctcaatcagatgcc
ttaatccttcaccatcgccctgacatcttcaagaggaagcagcaggaactgggggatcac
atggacctgtcctcctacctcctgaggcccatccagaggatcagtaagtacagcctgctt
ctgcaggacatgctggggatgtgtgcgcctcagagagacagggaagagctccaggctgca
gccgacgtggtccgcttccagatgcgtcatggcaacgacctcctcaccatggacgcaatc
caggactgtgacgtgaatctgaaggagcagggccagctgattcgccaggatgagttcatc
gtgttcttcagaaataagaaatgctcccgccgtattttcctcttccaggatctcatcctc
ttcagcaagaccaagaagaccaatgtgggcaatgatgtgtacatctacaaacagtctttc
aagacatctgatattgggatgacccataactctggagagagtggtttctgttttgagatc
tggttccggaggaggaagttccaggacacgtacactctgaaggctgacagggcggaggtg
aaaagcgcctggaccagagacctggagcagatcctctgggaacaagctgcctacagcaga
gagctgaggatacaggagagagtgttcatgggcacggggaggaaacctttcatggacata
cagcctaacgaggcagccatctgtgacagggccgtcaattgggacagggcaggcgtcggt
gacagggccgccaactgtgtcctgctaggaagagctcctgtgccgtcttttccacaaaca
gatcttgaatgtctccggcccaactccattggttcaggcagtagtgtctctacctcctgc
agccactcatcttcctcctctggacgaggttctttacctcctgtaggttaccctggtaac
cagatacaaggtgggaaaaccaatcacattgtctattcctccccggagactgtgacggtg
actgaagatgacctcaataaccatcataatcaccagaaacaaaatcttcatcttctcatg
gacagcatggagtcgtcaggtgagagtggcagtgtgttcagcagctcggagtgcagctgc
ctctctgccattggtggagaggtggaggactcgtcatctgtcacgtcccagagctcccaa
tcctgtgtcacccagagaacaggagcacccaatctcaggaagaacagctcccctgctatg
atcaggaagaagccctccattgctcccaaaccaccagcgctggctgctcctcagagcctg
caaaagggcaaaaaaatggttgctataggaaaatcaacagaagtttaa
DBGET
integrated database retrieval system
