Salvelinus namaycush (lake trout): 120059729
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Entry
120059729 CDS
T07522
Symbol
si:dkey-33c12.3
Name
(RefSeq) neurofilament light polypeptide
KO
K04572
neurofilament light polypeptide
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120059729 (si:dkey-33c12.3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120059729 (si:dkey-33c12.3)
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120059729 (si:dkey-33c12.3)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
120059729 (si:dkey-33c12.3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Fib_alpha
Filament_head
ATG17_like
DUF7201
TMF_DNA_bd
Bacillus_HBL
Phasin
PqqD
DUF1002
Golgin_A5
Phage_GP20
Motif
Other DBs
NCBI-GeneID:
120059729
NCBI-ProteinID:
XP_038864711
UniProt:
A0A8U1BVX5
LinkDB
All DBs
Position
Sna15:2907977..2911461
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AA seq
386 aa
AA seq
DB search
MSYDPYISYRHTWDSYRGSSRPSTTKSLMYSSLYSSSSSRALGLAAGKQRTLRPPASSSL
PDASARMDLAQASSLNTELLGLRSQEKEQLVGLNDRFATYIDKVRRLEQQNRALLAELEA
LRRRQRDPSRLQGLYEGEARSLRAAIDQKTGDKMRMEAERDYLRDVYGQLKERYEEEAQC
RADAEEALQRAREEVGRAMLSNCDAEASVVSLAEEMGFLKKVFVEEQAELQSQVVAANVF
VDMEVSRPDLSAALKEIRAQYERLANKNMQAAEDWYRGKFESVAEMASKNNEAVRSIREE
TMEYRRLLQSRSSEIEALRNVIESLNKQLEELEEHQGKEVTKYQVRINDLECDINEAKQE
MARYLREYQDLLNVKMALDIEIAAYR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgatccttatatctcctaccgccacacttgggacagctaccgaggctcttct
cgaccttccaccaccaaatccttaatgtactcctctctctactcctcctcttcctcccga
gccctgggtctggcagctgggaagcagcggaccctgcgtccaccggcctcttcctcactg
ccggatgcgtctgcacggatggacctggcccaggcctccagcctcaacacagagctgctg
gggctccgcagccaggaaaaggagcagctggtgggcctcaacgaccgcttcgccacctac
atcgacaaggtgaggcgcctggagcagcagaaccgggcccttctggcagagctggaggct
ctcaggaggaggcagagggacccgtcccgtcttcaggggctctacgagggtgaagcccgg
agcctcagggctgcaatcgaccagaagacaggagataagatgcgcatggaggcagagagg
gactacctgagggacgtgtacgggcagctgaaggagcgctatgaggaggaggcgcagtgc
cgtgcggatgcggaggaggccctgcagagggcccgggaagaagtggggcgggccatgctg
tctaactgcgatgcggaggccagcgttgtctccctggccgaggaaatgggcttcctgaag
aaggtgtttgtggaggagcaggcggagctgcagtcccaagtagtggcggctaacgtgttt
gttgacatggaggtgagcaggccagacctgtctgcggcactcaaggagatccgggcgcaa
tacgagcggctggccaataagaacatgcaggcggccgaggactggtaccgggggaagttt
gagtcagtggcggagatggcatcgaagaacaacgaggcggtgcgctccatccgggaggag
accatggaatatcgccggctgctccaatcacgctcctctgagatcgaggccctgcggaac
gtcatcgagtcgctgaacaaacagctggaagagctggaggagcaccaagggaaagaggtc
acgaagtaccaggtgaggataaacgatctggagtgcgacatcaacgaggctaagcaggag
atggctcgctacctcagagagtaccaggaccttctcaatgttaaaatggctctggacatt
gagatagctgcatacaggtaa
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