KEGG   Salvelinus namaycush (lake trout): 120059734
Entry
120059734         CDS       T07522                                 
Name
(RefSeq) calpain-3-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04141  Protein processing in endoplasmic reticulum
snh04210  Apoptosis
snh04217  Necroptosis
snh04218  Cellular senescence
snh04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120059734
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    120059734
   04217 Necroptosis
    120059734
   04218 Cellular senescence
    120059734
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120059734
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:snh01002]
    120059734
Enzymes [BR:snh01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     120059734
Peptidases and inhibitors [BR:snh01002]
 Cysteine peptidases
  Family C2: calpain family
   120059734
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III CAPN13-like_C_EFh EF-hand_1 EF-hand_6
Other DBs
NCBI-GeneID: 120059734
NCBI-ProteinID: XP_038864717
UniProt: A0A8U1EUR9
LinkDB
Position
Sna15:5303559..5322237
AA seq 638 aa
MPPPGVCMSIMQERHKEDGVGSLANAGKHRNQDFLQLKQYCLDRRVRYIDDVFPPDHNSI
GDGLLSPDDMRRVVWLRPAKIAQNPDFIISGFSRFDFGQGSIANCWFLASVGALTFQEHI
LEQVVPLEQSFKDDYCGIFHFRFWRFGRWVDVVIDDMLPTVDGRLIFVHSKTPNEFWPAL
MEKAYAKVCGSYADMNAGTPSEAMMDFTGGVHITFKLAENPPNLWDLLFRAAKFKSLMGC
GTPQGETSANTVAPNGLVRGHAYTVTGVLQIMSQGKPVNLIRLFNPWGYGEWKGDWSDKS
SMWKTVSPADRKMYLSVEEDGEFWMTMENFCQHFSDVTICCLCPDFLDGNSKGHWTPSFH
DGRWVAGTTAGGCILFRDSFWTNPQYRVKIEGFDRDFSETQGDNNMLVSLMQKPDKRNRR
LVKSVHIGINIFEFKGQRGKFPASFFDNNAPVAQTKDFLNARTVMLLCRLKPGEYLIVPS
SFKPNETASFILSILSKAETHIHHFTGCAKKTQGFSLESCRSMVALMDTSITGRLNSDEF
LRLWRKVTMYKDIFFRSDVDRSGMLSSSQLRNAIMASGIRLSDSLLNLIALRYGGSSGNI
SLESFISLVLRMDRMAKIFRELNNGGAISLRDNEVMTS
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgcctcctcccggtgtgtgtatgagtataatgcaagagcgccacaaagaagatggtgtt
gggagccttgccaacgctgggaaacacaggaaccaagacttcctgcagctgaagcaatac
tgtttggacaggagggtgaggtacatcgatgacgtgttcccaccagaccacaactccatt
ggtgatgggctactttcccctgacgacatgcgtagagtggtgtggttgagaccagcgaaa
attgcccaaaatccagatttcatcattagtggattttcaaggtttgactttgggcaagga
agtattgcaaattgctggtttcttgcttccgttggggctttgacattccaggagcacatc
ctggagcaagtagtacccctagagcagagttttaaagatgattactgcggaatattccac
ttcaggttctggaggtttgggaggtgggtggacgttgtgatcgatgacatgctaccaaca
gttgatggcaggctcattttcgtccattcaaaaactcccaatgagttttggcccgccttg
atggagaaagcctacgccaaagtgtgtggctcctacgcagacatgaatgcagggacccct
tcagaggctatgatggacttcactggaggggttcacatcacgttcaagctcgctgaaaat
ccaccaaatctgtgggacctcctgttcagagctgccaagttcaaatctctgatggggtgt
ggcacacctcaaggggaaacatcagcgaatacggtggcacccaacggattagtgaggggt
catgcttacaccgtcacaggagttctacagatcatgagccaaggcaagccagtgaatttg
atccgcctcttcaacccctggggctatggagagtggaagggagactggagcgataagtct
tccatgtggaaaacagtgagtcctgccgaccggaagatgtatctgtcagtggaggaggat
ggggaattctggatgacaatggaaaacttttgtcagcatttctcagatgtgactatctgc
tgtctgtgccctgattttcttgacggcaactctaaaggtcattggacgccttctttccat
gatggcagatgggtcgcagggaccactgctggtggttgcattctgttccgagacagtttc
tggaccaatccccagtatcgagtgaagattgagggatttgacagggacttctctgagaca
cagggggacaacaacatgcttgtgtctctgatgcagaagccagacaagagaaaccgacgc
ctggtcaaaagtgtccacatcggcatcaacatcttcgagttcaaaggacagagggggaag
tttcctgcctccttcttcgacaacaacgcacctgtcgcccaaaccaaggacttcctgaat
gctcggacggtgatgctcttatgcaggctgaaacctggcgaatacctgatcgtgccatca
tccttcaaacccaatgaaaccgcttccttcatcctgtccatcctctccaaggcggagaca
cacatccatcatttcacaggatgtgcaaagaaaacacaaggattcagcttggagtcctgt
cgaagcatggtggccctaatggatacatcaatcactggaagactgaacagtgatgaattt
ctacgtctatggagaaaagttaccatgtacaaggatatcttcttccgttcagatgtggac
cgttctggaatgttgtcatcgagtcaactgaggaacgcaatcatggcttcagggatcagg
ctgagtgatagcctgctgaacctgattgctctgcgctacggtggatcttctggaaacatc
agcctggagagtttcatcagcctcgtcctgcgcatggaccgcatggccaaaatattcaga
gaactcaataatggaggggccatatctcttcgagacaatgaggtaatgaccagttaa

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