Salvelinus namaycush (lake trout): 120059734
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Entry
120059734 CDS
T07522
Name
(RefSeq) calpain-3-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
snh04210
Apoptosis
snh04217
Necroptosis
snh04218
Cellular senescence
snh04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120059734
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120059734
04217 Necroptosis
120059734
04218 Cellular senescence
120059734
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120059734
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120059734
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
120059734
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C2: calpain family
120059734
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
120059734
NCBI-ProteinID:
XP_038864717
UniProt:
A0A8U1EUR9
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Position
Sna15:5303559..5322237
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AA seq
638 aa
AA seq
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MPPPGVCMSIMQERHKEDGVGSLANAGKHRNQDFLQLKQYCLDRRVRYIDDVFPPDHNSI
GDGLLSPDDMRRVVWLRPAKIAQNPDFIISGFSRFDFGQGSIANCWFLASVGALTFQEHI
LEQVVPLEQSFKDDYCGIFHFRFWRFGRWVDVVIDDMLPTVDGRLIFVHSKTPNEFWPAL
MEKAYAKVCGSYADMNAGTPSEAMMDFTGGVHITFKLAENPPNLWDLLFRAAKFKSLMGC
GTPQGETSANTVAPNGLVRGHAYTVTGVLQIMSQGKPVNLIRLFNPWGYGEWKGDWSDKS
SMWKTVSPADRKMYLSVEEDGEFWMTMENFCQHFSDVTICCLCPDFLDGNSKGHWTPSFH
DGRWVAGTTAGGCILFRDSFWTNPQYRVKIEGFDRDFSETQGDNNMLVSLMQKPDKRNRR
LVKSVHIGINIFEFKGQRGKFPASFFDNNAPVAQTKDFLNARTVMLLCRLKPGEYLIVPS
SFKPNETASFILSILSKAETHIHHFTGCAKKTQGFSLESCRSMVALMDTSITGRLNSDEF
LRLWRKVTMYKDIFFRSDVDRSGMLSSSQLRNAIMASGIRLSDSLLNLIALRYGGSSGNI
SLESFISLVLRMDRMAKIFRELNNGGAISLRDNEVMTS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccggtgtgtgtatgagtataatgcaagagcgccacaaagaagatggtgtt
gggagccttgccaacgctgggaaacacaggaaccaagacttcctgcagctgaagcaatac
tgtttggacaggagggtgaggtacatcgatgacgtgttcccaccagaccacaactccatt
ggtgatgggctactttcccctgacgacatgcgtagagtggtgtggttgagaccagcgaaa
attgcccaaaatccagatttcatcattagtggattttcaaggtttgactttgggcaagga
agtattgcaaattgctggtttcttgcttccgttggggctttgacattccaggagcacatc
ctggagcaagtagtacccctagagcagagttttaaagatgattactgcggaatattccac
ttcaggttctggaggtttgggaggtgggtggacgttgtgatcgatgacatgctaccaaca
gttgatggcaggctcattttcgtccattcaaaaactcccaatgagttttggcccgccttg
atggagaaagcctacgccaaagtgtgtggctcctacgcagacatgaatgcagggacccct
tcagaggctatgatggacttcactggaggggttcacatcacgttcaagctcgctgaaaat
ccaccaaatctgtgggacctcctgttcagagctgccaagttcaaatctctgatggggtgt
ggcacacctcaaggggaaacatcagcgaatacggtggcacccaacggattagtgaggggt
catgcttacaccgtcacaggagttctacagatcatgagccaaggcaagccagtgaatttg
atccgcctcttcaacccctggggctatggagagtggaagggagactggagcgataagtct
tccatgtggaaaacagtgagtcctgccgaccggaagatgtatctgtcagtggaggaggat
ggggaattctggatgacaatggaaaacttttgtcagcatttctcagatgtgactatctgc
tgtctgtgccctgattttcttgacggcaactctaaaggtcattggacgccttctttccat
gatggcagatgggtcgcagggaccactgctggtggttgcattctgttccgagacagtttc
tggaccaatccccagtatcgagtgaagattgagggatttgacagggacttctctgagaca
cagggggacaacaacatgcttgtgtctctgatgcagaagccagacaagagaaaccgacgc
ctggtcaaaagtgtccacatcggcatcaacatcttcgagttcaaaggacagagggggaag
tttcctgcctccttcttcgacaacaacgcacctgtcgcccaaaccaaggacttcctgaat
gctcggacggtgatgctcttatgcaggctgaaacctggcgaatacctgatcgtgccatca
tccttcaaacccaatgaaaccgcttccttcatcctgtccatcctctccaaggcggagaca
cacatccatcatttcacaggatgtgcaaagaaaacacaaggattcagcttggagtcctgt
cgaagcatggtggccctaatggatacatcaatcactggaagactgaacagtgatgaattt
ctacgtctatggagaaaagttaccatgtacaaggatatcttcttccgttcagatgtggac
cgttctggaatgttgtcatcgagtcaactgaggaacgcaatcatggcttcagggatcagg
ctgagtgatagcctgctgaacctgattgctctgcgctacggtggatcttctggaaacatc
agcctggagagtttcatcagcctcgtcctgcgcatggaccgcatggccaaaatattcaga
gaactcaataatggaggggccatatctcttcgagacaatgaggtaatgaccagttaa
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