Salvelinus namaycush (lake trout): 120059814
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Entry
120059814 CDS
T07522
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120059814
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120059814
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120059814
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Others
Platelet activating factor
120059814
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Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srv
PEN-2
DUF3382
Bac_export_2
DUF4184
Motif
Other DBs
NCBI-GeneID:
120059814
NCBI-ProteinID:
XP_038864792
UniProt:
A0A8U1EUS9
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Position
Sna15:complement(8643305..8648129)
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AA seq
395 aa
AA seq
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MELLALAEPTVESTMEMEEDMTVNTTVKLSTVGKITFLDSEFRYTLFPVFYGVVFVLGLI
ANSYVLFVLQRLRHAKAMSEIRIYMANLTVADLLFVCALPFWIGYYHHRGDWRYGDFLCR
VTGAFFFINTYCSILFLAAISVNRYWAITRPLDAASSDHWRRGVAVTMVIWALTLSMSVP
YLLETGIQVDDGNVSRCFEGYHNKTDDEKRTVATTHLIIVGCFVLVFFLVVVCNLLIARA
LLAQSPTQTRGSSSSQLRGVKGQALQMLCAVVGVFVVCFLPHHMVQGPWTLAVLEIKEGW
GRMDWGQRTRQWLNDAHQVTLMLMGLNCLLDPVVYCFATRKFRLYIKDHLKKVGRGKGCS
ETAITHISMVECKNVSQRLHSEQQQLFKSLDDIVL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggagttgcttgctttagcagaaccaacagtggagtcgaccatggagatggaagaggac
atgacagtgaacacgacagtgaaactatcgacagtcggtaaaataacctttctggactct
gagttccgttacaccctcttcccagtgttttacggtgttgtgttcgtccttggtctgata
gccaacagttacgtgctgttcgtgctgcagcgcctgcgccacgccaaggccatgagcgag
atccgcatctacatggccaacctgactgttgccgacctcctcttcgtgtgcgccctcccc
ttctggattggctactaccaccaccgcggtgactggcgctacggcgacttcctgtgccgc
gtcaccggcgcgttcttcttcatcaacacctactgctccatcctcttcctcgccgccatc
agcgtcaaccgttactgggccatcacgcgcccgcttgatgccgcctcgtctgaccattgg
cgccgcggagtggctgtcaccatggtaatctgggcgctcactctgtccatgtccgtgccg
tacctcttggagacgggcatccaggtggacgacggcaacgtgtcgcgctgctttgagggc
taccacaacaagactgacgacgagaagcggactgtggccaccacccacctcatcatcgtg
gggtgcttcgtcttggtcttcttcctcgtagtagtctgtaacctgctcatcgcccgtgcc
ctgctcgcccagtcccctacccagactcggggctccagttcatcccagctccggggggtt
aagggccaggccctgcagatgctgtgtgccgtggtgggggtgttcgtggtgtgcttcctc
ccccaccacatggtccagggcccctggactctggctgtactggagatcaaggagggctgg
ggcagaatggactggggccagcggaccaggcagtggcttaacgatgcccaccaggtcacc
ttgatgctgatggggctcaactgcctcctggaccctgtagtgtactgcttcgccaccagg
aagttccgcctctacatcaaggaccatctgaaaaaggtggggagggggaaaggatgctcg
gaaacagccatcacacacatttctatggtggagtgcaagaatgtgagccagcggctccat
agcgaacagcagcagctgtttaaatctctagatgacattgtattgtag
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