Salvelinus namaycush (lake trout): 120059854
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Entry
120059854 CDS
T07522
Name
(RefSeq) 5'-3' exonuclease PLD4-like
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00564
Glycerophospholipid metabolism
snh00565
Ether lipid metabolism
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120059854
00565 Ether lipid metabolism
120059854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120059854
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120059854
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120059854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Motif
Other DBs
NCBI-GeneID:
120059854
NCBI-ProteinID:
XP_038864832
UniProt:
A0A8U1C1V2
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All DBs
Position
Sna15:17809574..17814172
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AA seq
490 aa
AA seq
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MPEMSSPYNTLHDSDVPNIRGSKRLVSIAVAVGCLTAFGALLTFSMYEKSTEKHFQNYKI
FQETNTDQNNISEEQSRIILVESIPLYMKYDDNATFGTPVDKAWRDLLSMATYQVDVASF
YWTLTGDDININSSTDLPGKNILEQFGALPSRNVSVRVVTSIPSVLTNSTDLHVLRQKGV
QVRKVPFGRLTGGVLHSKFWIVDRKHIFLGSANMDWRSLTQVKELGVVIYNCSSLAEDLH
KIFESYWVMGHRNSSIPNPWPSKYDTAINKEHPLLLKTDNVSSKIYITASPPSFCPASRT
QDLDSILSVISGAQHYIDVAVMEYFPTTRFTHPQRYWPAIDDALKRAAFERNVKVRLLVS
CGRDSDPAMLPFLQSLASLNYPAQRISIQVKLSIVPVGNQSEIPHSRVNHNKYMVTDKMA
YIGTSNWSADYFNTTAGVGLVVSQHAPHWAWTTQALQGQLRAVFERDWQSQFTVRLADLG
HHPDCALSKG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgccagagatgtcctctccttacaatacattacatgatagcgatgttcccaacataagg
ggctccaaacggcttgtgtcaattgctgtggcagtgggatgtttgactgcattcggggca
ctgctcaccttttctatgtatgagaagagcacagaaaagcatttccaaaactacaagatc
ttccaggaaacaaacactgatcaaaataacatttctgaagagcaaagccgtataatcctc
gtagagagcattcccctgtatatgaaatatgacgacaatgcaacctttgggaccccagtg
gacaaggcctggagagatctcctgtccatggcaacctaccaagtcgatgtggcttccttc
tactggactcttaccggtgatgacatcaatatcaactcttccactgacttgcctggaaag
aacatactggagcagtttggagctttaccttccagaaatgtgtcagtgagagttgtgaca
agtattccctctgtgctgacaaactccacagatcttcatgttctgagacagaaaggagtc
caagtaagaaaggtgccctttgggcgtttgactgggggtgtactccacagtaagttctgg
attgttgataggaaacacattttcctgggaagtgccaacatggattggaggtctcttaca
caggtaaaggaactgggagtggtgatctataactgctccagtctggctgaggacctccat
aagatctttgagtcatactgggtgatgggtcatcgcaacagctccatcccaaacccttgg
ccctccaagtatgacactgccatcaacaaagagcaccccctgctgctgaagactgataat
gtttcaagcaaaatctacatcacagcctctcctccctctttctgccccgcctctcggacg
caggaccttgattctatcctctcagtgatctcaggggcacagcactacattgatgtggca
gtcatggagtatttccccaccacacgcttcacacaccctcaaaggtactggccagccatt
gatgatgcattaaagagggctgcttttgagcggaatgttaaggtccgtctgctggtgagc
tgtggacgggattctgatccagccatgctgcctttccttcagtctctagcctccctgaat
taccctgcccagcgcatcagcattcaagtgaaactgtccattgtgccagtagggaaccag
tcagagataccccactctagagtaaaccataataaatacatggtgactgataaaatggca
tatattgggacatctaactggtcagctgactacttcaacaccacagctggagtggggctg
gtggtttcccagcacgcaccacactgggcctggacgacccaggctctgcaggggcagctc
agagcagtatttgaaagggactggcagtctcagtttactgtacgtctcgctgacttgggt
catcaccctgactgtgccctctcaaaaggatag
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