Salvelinus namaycush (lake trout): 120059911
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Entry
120059911 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120059911
04082 Neuroactive ligand signaling
120059911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120059911
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120059911
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
120059911
NCBI-ProteinID:
XP_038864914
UniProt:
A0A8U1GV30
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Position
Sna15:26443139..26490649
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AA seq
464 aa
AA seq
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MVCGAQSANEPSNMSFVKATVDKLLKGYDIRLRPDFGGAPVDVGMSIDIASIDMVSEVNM
DYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADSLWVPDTYFINDKKSFVHGVTVKNRM
IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGDNSVT
GVENIELPQFSIIDYHIQSTKAVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILS
WVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLAL
LEYAFVNYIFFGRGPHLQKKVAEKAAKTNNENKSRLESNKVDAHGNILLTNLEIRNEMGG
MGGMAGMTGAEMIGALNDPRATMFSYDSASIQYRKPMASRDLYGRPALDRPVGHKKSRLR
RRASQLKVKIPDLTDVNAIDKWSRVIFPIAFTFFNLVYWMYYVH
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggtctgcggcgctcaaagcgccaacgagcctagcaacatgtcatttgtgaaagcgacc
gtggacaaactgcttaaggggtatgacattcgtctgaggcctgattttggaggtgcccct
gtggacgttggaatgagcatagatatcgcaagtatcgacatggtttctgaagtcaacatg
gattacaccatcaccatgtacttccagcagtcctggagggacaagcgcttgtcctacaca
gggattcccctcaacctgacgctggacaacagggtggcagactcgctctgggtccctgac
acctacttcatcaacgataagaagtcctttgtgcacggggtcacagtgaagaacagaatg
atccgactgcatccagacggaactgtgctctacggcctcaggatcaccactacggcagct
tgcatgatggatttgcgtagataccctctggacgagcagaactgcaccctggagatcgag
agctatgggtacaccactgatgacatcgagttctactggaaaggtgataattcagtgact
ggggtggagaacatcgaacttccccaattctctattatagactaccacatccaatccaca
aaagctgtgtttgctacaggctcctacccgaggctctctctgagttttaagctgaagagg
aacattggctacttcatcctacagacctacatgccctccaccctgatcaccatcctatcc
tgggtctccttctggatcaactatgacgcgtctgcggccagagtcgctttaggtataacc
actgtgctgaccatgaccaccatcaacacccacttgagagagactttacccaaaatcccc
tatgtcaaggctatagacatctacctgatgggctgcttcgtgtttgtcttcctggccctg
ctggagtacgcgttcgttaactacatcttcttcggtcgggggcctcacttacagaaaaag
gtggcggagaaagcagctaaaaccaataacgaaaacaagagccgtctggagagtaacaaa
gtggacgcccacggaaacatcctcctgaccaatctggagatccgtaacgagatgggtggg
atgggtggcatggccgggatgaccggggccgagatgataggggctctcaacgacccgcgg
gccaccatgttctcctacgacagcgccagcatacagtaccgcaagcccatggccagccga
gacctgtatggtcgaccggccctcgaccggcctgtcggccacaagaagagtcgtttgagg
aggagggcgtcgcagctcaaagtcaagatcccagacctgacggatgtcaatgccatagac
aagtggtcccgcgtcatcttccccatcgcctttaccttcttcaacctggtctactggatg
tactacgtccactaa
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