Salvelinus namaycush (lake trout): 120059985
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Entry
120059985 CDS
T07522
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120059985
03036 Chromosome and associated proteins [BR:
snh03036
]
120059985
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120059985
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120059985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
120059985
NCBI-ProteinID:
XP_038864990
UniProt:
A0A8U1GYH3
LinkDB
All DBs
Position
Sna15:complement(21217061..21323770)
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AA seq
1435 aa
AA seq
DB search
MPRETATSMDIVEDFPPPPPEMLADEVPYADEEEGEQFEFDDSGDEFPEADRSPHAPPAP
DYGGKTQINGVAHHPQQEGPDPRPSNTEPTAAAADTDTVAAEPPVPVAMATTDTVISAPE
APVANATTETTAPVAAAEGDKTSSVPADADSDLPPPPPPEDSTPVGTDSVNTNKEVSSDD
PPLAVPRTTSQKKVNPYSVIEITPLQLQQLEQQHGPVPTSSSPGERVGGEGEREGKGQDV
PPASPLCVPSGYSVPVPCGYATPSGVPLITPAYTTPVIIRHFSVDEDDTVVGTGNISVDI
EEYPAIREEDALSKWVSDPANTAWMENPDEVIYDDVPRENSDSTTEPDEMIYDDVEFGEE
GCGSSLDNGWSSSEFESYDEQSDGEGRGENGLPDAFMRGKPPQRKTHMQKLVKAARDGTK
DGLEKTKAAVRRGRSYIKTHCHERKSTCFEDEESELFIEVECFNMEPVLSPVPEGLSQQQ
VVRRCILGSILESEKNYLDALKRILEQYEKPLLEIEPRLLSDRKLKVTFYRIREILQCHA
LFQIALACRVAEWDSLEMIGDVFVASFSKSMVLDAYCEYVNNFSTAMAVVRKTCASKPSF
LDFLKQRQDTSSDRVTLYGLMMKPIQRFPQFILLLQDMLKNTPAGHSDRLPLQMALTELE
TLAEKLNEKKREADQRCEIRHIAKAMNERYLNKLLSNGSRYLIRSDDIVETVYNDHGEVI
KTKERRLFLLNDVLMCATPNVRCSVDGSGSGNAALGQKFLLKWSVPLSFVDVVEFGSSED
MGDNSRFTNQPHSGEKVIINAKPNKLYMGPGQLYQDLQNLIHDLSLVNQISSMIGSLKGN
YQNVNPTVAHDWVSGLQRLILKKEDEIRAADRCRIQLQLPGKPDKSGRPTYFSAVFNTFS
PAIKQSWISNLQMAKLALEEDNLQGWFFAEDDGNQIKKQKHPLLLRQMPVVMSKLQEFKV
ECAVHNPEPHINIESTADTPALGHGCVWVASCTNQMGQIAIIAMQNSSPKVTECFNVESR
ILCMAYVPMEQRTQENGEGNPENNHSSAGKTSDAPTVCLGMEEGSIIVYKSSQRSKKVRL
QHFFTPDKSTVTSLVHKKQCLYTGLVNGSVTIYSRAQDGSWNPDSPKVLKLGVLPVKAIL
AVEEHVWASSGGQVFIISTTTHTVERQLEAHQEEGMVVSHMVVAGVGIWIAFSSGSTLRL
FHTETLEDLQDINIATPVHNILAGNQRVSVSSLLVCHGLLLVGTNLGVTVALSVPRLQGI
PKVTGRGMVSFHAHHGPVKFLTMAAAVCNRPSGNPGSSLPSQPGDTKDGEKAQASPPPTP
GSTPALAPTQGRGVWLGEAGCTSMAIQDSLSSSCGSLALSQGSLEHGPEDGAIYDLVNDP
AHHQRGRRVQKVDVSSLLVVSGGLGHHRVNRKTKQSRQEETVSNIMVWQIPLLNM
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagaaacagcaaccagtatggacatcgtggaagacttccctcccccgcctcct
gaaatgttggcggacgaggtgccctatgccgatgaagaagagggggagcagtttgagttc
gacgacagtggggatgagttccctgaggcagaccggtcaccccatgcccctccagcccca
gactacgggggcaagacccagatcaatggtgtggcccatcacccacagcaggaaggacca
gacccccggccctccaacacggagcccacagcagcagcagcggacacagacacagtggca
gctgaaccaccagttccagtagccatggctacaacagacacagtgatatcagcaccggaa
gctccggtagccaatgctacaacagaaacaacagctccagtggcagcagcagaaggggac
aagacttcatctgtcccagctgatgcagacagtgacttaccccctcctccacctccagag
gactccactcctgtaggaacagactccgttaacacaaataaggaagtgtccagtgatgac
cctcccctggccgtccccaggaccacctcccagaagaaagtcaacccctactctgtgatt
gaaatcacccccctccaactacagcagctggagcagcagcatgggcccgtccctacctct
tcctcaccgggtgagagggtgggaggagagggggagagggaggggaagggccaggatgtt
ccccccgccagccctctttgtgtcccatcaggctactctgtgcccgtgccctgtgggtac
gccaccccctctggtgtgcccctcattacgccagcctacaccacgcccgtcatcatccga
cacttctccgtggacgaggacgatactgtggtggggacaggcaacatttctgttgacatt
gaagagtatcctgccatcagagaggaggatgctttgtctaaatgggtgtcggaccctgca
aacacagcctggatggaaaatccagatgaagtaatttatgatgacgtgcccagagagaac
tctgactccactacagagccagacgagatgatctatgatgatgtggagtttggggaggag
ggctgtggcagctccctggacaacggctggagctccagcgagtttgagagctatgatgag
cagagtgacggggagggccgcggggagaatggcctgcctgacgccttcatgagagggaag
cccccacaaaggaagacccatatgcaaaagctggtgaaggcagcgagagacgggaccaaa
gacggcctggagaagaccaaagcagcagtgagaaggggacggtcgtatatcaagacccac
tgtcacgagaggaagtcaacctgttttgaggatgaggagtcggagctattcatcgaagtg
gaatgcttcaacatggagccagtgctcagtcccgtccctgaggggctctcacaacaacag
gtggtgaggaggtgtatactgggctccatattagagagtgagaagaactatcttgatgca
ctgaagcggattttagagcaatatgaaaagccacttttggagattgagcccaggttgcta
agcgataggaagctgaaggtgacattctatcgtatccgggagattctccagtgccacgcc
ctgttccagatcgccctggcgtgccgcgtggccgagtgggacagtctggagatgatcggg
gacgtctttgtagcctcgttctccaagtccatggtgctggatgcctactgtgagtatgtg
aacaacttcagcacagccatggcggtggtcaggaagacgtgtgcctccaaacccagcttc
ctggacttcctcaagcaacgtcaggacaccagcagtgaccgggtcactctctatggactc
atgatgaagcccatccagagattccctcagttcattctgctgctgcaggacatgttgaag
aacacaccagcaggccacagtgacagactgcccctacagatggccctgacagaactggag
accctggctgaaaagctcaatgagaagaagagggaggctgaccagcgctgtgagatcaga
cacatagccaaggccatgaacgaacgctacctcaacaagctcctgagtaacggcagccgc
tacctgattcgctctgacgacatagtggagacggtctacaacgaccacggagaggtcatc
aagaccaaggagcgacgccttttcctgctcaacgacgtgctcatgtgtgccacgcccaac
gtccggtgcagtgttgatggcagtggtagtggcaacgccgccttgggtcagaagttcctg
ctgaagtggagtgtccctctgagctttgtggacgtagtagagtttggctccagtgaagac
atgggcgacaacagccgcttcaccaaccaaccccactctggagagaaggtgatcatcaat
gccaaaccaaataagctgtacatgggtccaggccagctgtaccaggacctgcagaacctc
atccacgacctcagcctggtcaaccagatctccagcatgatcggaagcctcaagggaaac
taccagaacgttaaccctacggtggcccatgactgggtgtcaggtctgcagcgtctcatc
ctgaagaaggaggacgagatccgggctgcagaccgctgtaggatccagctgcagctgcct
ggcaaaccggacaagtctggcaggcccacatacttcagtgcagtgttcaatacgttctct
ccggccatcaaacagtcatggatcagtaacctgcagatggccaagctggctctggaggag
gacaacctgcagggctggttctttgcagaggatgatggtaaccagatcaagaagcagaaa
catcctctcctgctcaggcagatgcctgtggtcatgtccaaactacaggagttcaaggtg
gagtgtgcggtccataaccccgagccccacatcaacatagagagcacagcagacacccct
gctctgggacatggctgtgtgtgggtggcgagctgcaccaaccagatgggtcagatagcc
atcatagccatgcaaaactccagccccaaagtgacagagtgcttcaatgttgagtcacgg
atcctgtgtatggcgtacgtacccatggagcagaggacccaggagaacggggaggggaac
cccgaaaataatcactcctcagcagggaagaccagtgatgcccccacggtctgtctgggc
atggaggagggcagcatcatagtctataagagcagccagcgatccaagaaggtccgtcta
caacacttcttcaccccagacaagtctaccgtgaccagcctggtacacaagaagcagtgt
ttatacactggcctagtgaacggctcagtcaccatctactccagagcacaagatggctcg
tggaatccagactctcctaaggtgctgaagctgggggttctgccagtgaaggccatacta
gctgtggaggaacatgtctgggcttcctctggaggacaagtcttcatcatcagcactacc
acacacactgtggagaggcagctggaggcccaccaggaggagggcatggtggtatcccac
atggtggtggctggggtgggtatctggatagccttcagctctgggtccaccctcagactg
ttccacacggagacgctggaggatctacaggacatcaacatcgctacacctgtacacaac
atactggctgggaaccagagggtctcagtcagcagtctgctggtgtgccatggtctgctg
ctggtggggaccaacctgggggtgacagtggccctctctgtccccagactacagggaatc
ccgaaggtcacaggacggggcatggtatccttccacgcccaccacggcccagtaaagttc
ctcaccatggcagccgcggtgtgcaaccggccctccggcaacccaggcagcagcctacct
agccagccaggagacaccaaggacggggagaaggcccaggcctccccacctccaacccca
ggctccacacccgctctagctcccacccagggccggggagtgtggctgggggaggcaggc
tgcacctccatggccatccaggactccctgtcttcctcctgtggctccctggctctgtcc
caggggtctctggagcacgggcccgaggacggggccatctatgacctggtcaatgatccg
gcccaccaccagaggggcaggagggtccagaaggtggacgtcagctctctgctggtggtg
tcaggggggctgggtcaccacagggtcaacaggaagaccaaacagtcccgtcaggaggag
acggtgtccaacatcatggtgtggcagatccctctactcaacatgtga
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