Salvelinus namaycush (lake trout): 120059987
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Entry
120059987 CDS
T07522
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120059987
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120059987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
EGF_3
hEGF
EGF_2
Plasmod_Pvs28
DUF7630
TrAA12
Motif
Other DBs
NCBI-GeneID:
120059987
NCBI-ProteinID:
XP_038864993
UniProt:
A0A8U1GV69
LinkDB
All DBs
Position
Sna15:complement(21573284..21649238)
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AA seq
1737 aa
AA seq
DB search
MCMVFCQIPCLNGGRCIGRDQCWCPSNSTGKFCHLPAPPSARPTLSRKDGSLAGLNSSSH
SMYTLPLSNQQVSLHPSLVNVHIQHPHEAEVQIHQVARVKLGQRPPAAEGGHSIQQRSQS
GHGNGNGHGYGHSNGNGHGNGHGNGHTFANGNGSSHSRPHNRQNGYVGRCFQETVDGQCG
KPLPGLTKQDDCCGSVGASWGLNKCTECPTKPAYAVIANGQVECPKGYKRVNLTHCQDIN
ECLMNGICKKAECLNTRGSYRCTCKPGYMLDPARSHCVSDKAVSDQRGMCYRSASAGTCS
LPLTQHITKQICCCSRVGTAWGTASDTACERCPLPDTDHFKEICPAGHGYTYSRSDVQIS
LRQLEEEELRRTGVSWEAQNPSHPQLPQQPAQPPQQLPHVPLTPQIPQYPHHPQEIPQTP
QYPHHPQHPQELPQHSHHPEQPHHPEHPQTPQNPQYPHTVQQPRYPLHPDPDTQHPAEET
HSQPQDVEILNPSPVATDSPLKYSDVVEKVTPDSPINLGPESDGQHTASIIVATQVTDID
KCAITPTICGHGLCVPVQTGYTCYCDPGYKLNALQTNCIDVNECEEDPCGGKGRCVNTFG
SYTCHCYSGYNQVITQNRKFCHDINECDMANKCQDGDCFNTEGSYTCECKSGYAKSWRGQ
CEDVDECQDPRSCPSGRCVNAPGSFQCQACGPGFKAARGRCLDVNECLDQSVCFHGRCVN
SEGSYSCNCYQGYQASLDNNSCQDMDECLLPGACLHGRCVNLDGSHRCSCNPGYQTTPDS
RACDDVDECATPNVCPGGICTNTEGSYSCKNCSPGFQRSADKQRCEDVDECSQTDMCLGG
VCANTEGSFTCTSCKDGYRVSQDRQRCEDIDECQSGSVCANGICLNAEGSYSCITCPSGY
SVSLDGELCEDIDECVLPTTCPKGTCTNTEGSFICTTCRPGYRVTEDGLECEDVDECLVA
NVCPGQLCRNSPGSFSCRSCGTGFTLSEDGSHCMDINECLSTGVCPMGVCNNTEGSYSCM
TCDLGYTLAPNKLFCEDINECEDSGLCLGGQCTNSPGSYSCSCPPGLELVDGTSCRGDQW
RKTAVEVQREVRVERFQVQWRVEDVNECSKDGVCSHGQCLNTDGSYLCLCEAGFKYSADT
ADCEDQNECKEYGSSVCGIWLCENTIGSYRCFMGCQPGLYGQDNPDCDIDECVNETICGD
HGFCENTDGSYRCQCDRGYTNPPGDAGAHGCVDVNECEMSSALCGEALCENVDGSFLCIC
PSDNEEFDPITSQCRPQAATDEDAPPHPPPKPASPTEEQRKECYYNLNDANFCDNVLSRN
TTKQECCCTVGSGWGDDCEIHPCPVPGREEYNQLCPHGSGLLPQAVSSHSLEQQSFKDVD
ECKMFEPDICKNGRCSNIFSSYSCFCRTGFYYDNIRLECVDYDECLTEKACVGGVCVNTP
GSFNCFCSPPLVLDTTCRHCISVNTTEEIDEPDEDIHLDICWRDMIELYVCIQPLIGWRT
TYTECCCLYGVAWSEQCAFCPSRDSDDYALLCNLPRRRGSDSLRERPGNEFGPGVEGPEG
PYVPPYWDNYGGGPISGPGGTYYNPEDTQGNTNDYGSRVRDREPSLRVPIHRPREFQPHP
VDSNNDHYDGFEGLRAEECGILNGCENGRCVRVREGYTCDCFDGYELDLTKMACIDINKC
EDISDKVALCKNGACTNTEGSYKCTCLPGFQASAKPHECIPEVPLSGLRESGWKLRV
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatggtcttctgtcagatcccctgtctgaatggtgggcgctgcattggcagggac
cagtgctggtgcccatcaaactcgacagggaagttctgccacctcccggcccccccttct
gccagacccaccctcagccggaaggacggcagcctggccggacttaactcctcatcccac
tccatgtacacgctgccgctgtccaatcaacaagtctctctacatccgtccctggtgaat
gtccacatccagcacccccatgaggctgaggtccagatccaccaggtagcccgggtcaag
cttggccagagaccccccgcagccgaggggggtcactctatacagcagcgctcccaatct
ggccatggcaacggcaatgggcatgggtatgggcactccaatggaaacggacatgggaat
gggcacggaaacggacacacctttgccaacgggaacggcagtagccactccagaccccac
aaccggcagaacggatacgtgggaaggtgcttccaagagaccgtcgatggacagtgtggg
aagcctcttcctggcctgaccaaacaggatgactgctgtggaagtgtgggagcctcatgg
ggcctgaacaagtgcacagagtgtccaaccaaaccagcgtatgcagtgattgcgaacggc
caagtggaatgccccaagggttacaagagggtgaacctgactcattgtcaagacatcaat
gagtgcctgatgaatgggatctgtaagaaagctgagtgtctgaataccagaggaagctac
agatgcacctgtaaaccaggctacatgctggaccctgccaggagccactgtgtctcggac
aaggctgtgtcggaccagagggggatgtgttaccgctcagcatcagcagggacctgctct
ctgcccctcacccagcacatcaccaaacagatctgctgctgcagccgtgtgggcacggcc
tggggcacggccagtgacacggcctgcgagaggtgccctctgccagacacagatcatttc
aaggagatctgtcccgctggccacggctacacatactcgcgctccgacgtgcagatctcc
ctgagacagctggaggaagaggagctgaggaggacaggtgtttcctgggaggcccagaac
cctagccacccccaactgccccagcagccagctcagcccccgcagcagctgccccacgtc
ccactgaccccacagatcccacaatacccacaccatccacaggagatcccccagacccca
cagtacccccaccatccacagcacccccaagagctcccacagcactcccaccatccagag
caaccccaccatccagagcacccccagacacctcagaaccctcagtaccctcacaccgta
caacaaccccggtaccctctccatccagacccagacacacagcatccagctgaggagacc
cacagccagccacaagatgtggaaatattgaacccgtctcctgttgcgacagactcacca
ttgaagtactccgatgtggtagagaaagtcactcctgactctcccatcaacctggggcct
gagtctgatggccagcatacagcctccatcatcgtggccactcaggtcacagatattgac
aagtgcgccatcactccaaccatatgtggccatgggctgtgcgtgccagtgcagacaggc
tacacctgctactgtgaccccggctacaaactgaacgcgctccagaccaactgcattgat
gtgaatgagtgtgaggaagacccttgtggagggaagggccgttgtgtgaacacctttggc
tcctacacttgccactgctacagcggctacaaccaggtcatcacccagaacaggaagttc
tgccatgatataaatgagtgtgacatggccaacaagtgccaggatggggactgtttcaac
acagagggatcttacacctgtgaatgcaagagtggctacgccaagtcctggaggggtcag
tgtgaagatgtggatgagtgccaggacccccgctcatgccccagtggaaggtgtgtcaac
gccccaggctccttccagtgccaggcttgtggccccgggttcaaggctgccagagggaga
tgtctggacgtaaacgagtgtttggaccaatcggtgtgcttccatggtaggtgtgtcaac
tccgagggctcttacagctgtaactgttaccaaggataccaggcctctttggacaacaac
agttgtcaagatatggatgagtgtctgctccctggtgcctgcctccatggcaggtgtgtc
aatctggatggctcccacaggtgcagctgtaaccctggttaccaaaccactcctgacagc
agggcctgtgacgatgtcgatgagtgtgctactcctaatgtgtgccccgggggaatttgc
actaataccgaaggttcctactcatgcaagaactgcagcccgggattccagcgatcagcg
gataaacagagatgtgaagatgtggatgagtgctcccaaacagacatgtgtctaggaggg
gtatgtgccaacacagagggctccttcacctgcaccagctgtaaggacggatacagggtt
tcccaggacaggcagaggtgtgaggatattgatgagtgccagtctgggtctgtgtgtgct
aacggaatctgtctgaacgctgagggctcctactcctgcatcacctgtccctcaggctac
agcgtctcccttgatggagagctctgtgaagatattgatgagtgtgtgctgcccactacg
tgccccaagggaacatgcaccaacacagagggttctttcatctgcaccacctgcaggcca
ggctacagagtgactgaggatgggctggagtgtgaagatgtggatgagtgcttggtggct
aacgtgtgcccaggccagctgtgtaggaacagtcctggatccttctcctgcaggagctgt
gggactggctttaccctgtctgaggatggctcccactgcatggacataaacgagtgcctg
tccacaggggtctgtcccatgggcgtttgcaacaacacagagggttcttactcctgtatg
acctgtgaccttggctacacgctggcgcccaataagctcttctgtgaagacatcaatgag
tgtgaggacagcggtctgtgtctgggaggacagtgcaccaacagccctggctcctacagc
tgctcctgtcccccgggtctggagctggtggatgggacgtcctgcagaggcgatcagtgg
agaaagacagcggtggaggtgcagcgagaagtcagagtggagaggttccaagtccaatgg
cgtgttgaagatgttaatgagtgcagtaaggacggtgtgtgctcccatggccagtgtctc
aacacagatggctcctacctctgcctgtgtgaggctggcttcaagtactctgcagacaca
gctgactgtgaggatcagaatgagtgtaaggagtatggtagctcggtgtgtggcatctgg
ctctgtgagaacactattggctcgtatcgctgcttcatgggctgccagcctggcctgtat
ggacaggacaacccagactgtgatatcgatgagtgtgtgaatgagaccatctgtggggac
catggcttctgtgagaatacagacggctcctaccgttgtcagtgtgaccggggttacacc
aacccccctggtgatgccggggcccatggctgtgtagacgtgaacgagtgtgagatgagc
tcagcgctgtgtggagaggccctgtgtgagaacgtggacggcagcttcctgtgcatctgc
cccagcgacaatgaggaatttgatcccatcaccagccagtgccgaccgcaggctgctaca
gatgaagatgctcctcctcatcctcctcctaagccagcctcacccacagaggagcagagg
aaggagtgttactacaacctgaatgatgctaacttctgtgacaacgtgctgtctcgcaac
acgaccaagcaggagtgctgctgcacggtggggtccggttggggggacgactgtgagatc
cacccctgccctgtcccagggagagaggagtataaccagttgtgtccacatggtagtggt
cttctgccccaagcggtttcctcccacagcctggaacagcagagtttcaaagatgtggat
gagtgtaagatgtttgagccagatatctgtaagaatggccgttgttctaacatcttctcc
tcgtactcctgcttctgccgtacaggcttctactacgacaacatccgtctggagtgtgtg
gattatgacgagtgcctgacagagaaggcgtgtgtcggtggggtgtgtgtgaatacccct
ggctctttcaactgcttctgcagtcctcctctggttctggacaccacctgccgccactgc
atcagcgtcaacaccaccgaggagattgatgagcctgatgaggacatccatctggacatc
tgctggcgggacatgatagaattgtatgtgtgtatccagcccctcatcggatggaggacc
acctacacagagtgctgctgtctctatggagtggcctggagtgaacaatgtgccttctgc
cccagtagggactctgatgactacgcattactttgtaacctgcctaggagaaggggctct
gacagtctacgagagaggccaggcaatgagttcggccctggtgtcgagggtcctgaaggg
ccctatgtccccccctactgggacaactatggaggagggcccatttctgggcctgggggt
acctactacaacccagaggacacccagggcaataccaacgactatggctcacgagtgaga
gacagagaaccgtcactacgcgtccccatccaccggccaagagagttccagcctcaccct
gtagactctaacaatgaccactatgatggctttgaaggcctgcgagcagaagagtgtggt
atcctgaacggctgtgagaatggccggtgtgtgcgcgtgagggaaggttacacctgtgac
tgctttgatggatacgagcttgacctcaccaaaatggcctgcatcgacataaacaagtgt
gaggacatcagtgataaagtggcgctgtgtaagaatggggcctgtaccaacactgagggg
tcgtacaagtgcacctgcctgcccggcttccaggcctccgccaagccccatgaatgtatc
ccagaggtcccattgtctggcctcagagagagtggctggaaactgagagtgtaa
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integrated database retrieval system
