Salvelinus namaycush (lake trout): 120060018
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Entry
120060018 CDS
T07522
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120060018
Membrane trafficking [BR:
snh04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120060018
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
Ig_2
ig
LRR_9
LRR_EndoS
LRR_R13L1-DRL21
LRR_NXF1-5
V-set
LRR_Zer-1
LRRNT
LRRCT
Big_6
Ig_C17orf99
Big_2
LRR_6
Motif
Other DBs
NCBI-GeneID:
120060018
NCBI-ProteinID:
XP_038865016
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All DBs
Position
Sna15:complement(26148207..26150042)
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AA seq
611 aa
AA seq
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MRRSALYHCYPLLGGALLLLLVSCVLGCPARCDCSAQTKSVSCHRKRLPTIPEGIPIETR
LLDLSKNKLRSITPDNFSSFLQLEDLDLSDNLIGVVEPGSFKFQLSLRSLNFHSNLLQLV
PAGVLSGLANLTSLDLSHNRLVVLLDHGFQDLRRLMSLEVGDNELVFISQRAFTGLLGLQ
SLTLERCNLTVVPTDALGHLHSLVELRLRHLGIGALKPYSFKRLPHLRHLEIDYWPWLEV
FPALSLHGLNLTTLTVTNTNLSSFPGPALRNLPYLTHLNLSFCRIQHIQQGVLDKLPRLQ
ELHLRGAQLAYIEPLAFLVLPNLRMLDVSHNQLDSVEQAVFASPDSLQTLLMGGNPLVCD
CRLLWLLSGRKPPLLQLPDPQPECSAPERIRGKPLRDLKEPLVSRYVTCTKPWIGPNTTQ
LLLADEGQPVWLNCIADGAPRPSMAWVTPHRRYVTAKSTGRVTVHTNGTLEIKAAELHDN
GVYLCVASNAAGNASMSASLAVKSLGISDRSLYTNKSGLLADSNGTWANGTLLYNMTNPI
DLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDIEYVPRKSNGTAAEANET
SGPRRVNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctctgccctgtaccactgctatcctcttctgggcggggctctactgctcctg
ctggttagctgcgtcctgggttgccccgctcgctgcgactgctccgcccagaccaagtca
gtcagctgccaccgcaagcgactgcctaccatccccgagggcatccccattgagactcgg
cttctggatctgagcaagaacaagctgcggagcattacaccggacaacttctcctccttc
ctacagctcgaggatctagacctcagcgataacctgataggcgtggtcgaaccgggctcc
ttcaaatttcagctctccctgcgctcgctgaacttccacagcaacctcctccagctggtc
cccgccggtgtgctctctggcctggccaacctcaccagtctggacctcagccacaaccgg
ttggtggtgctgctggaccacggcttccaggatcttcggaggctgatgtccctggaggtg
ggtgacaatgagctggtgttcatctcccagagggcctttactggcctgctgggcctacag
agcctcaccctggagcgctgcaacctgactgttgtgcccactgatgccctggggcaccta
cacagcctggtggaactccgcctgcgccacttgggcattggtgccctgaagccctactcc
ttcaaaagacttccccaccttcgccacctggagattgactactggccctggctggaagtc
ttccccgctctgtcgctacacggtctcaacctcaccacactcactgtcaccaacactaac
ctgtcctcttttcccggccctgctctacgcaacctgccctacctcacgcacctaaaccta
tccttctgccgcatccagcacatccagcaaggggtgctagacaagcttccgcgactgcag
gagttgcacctgcgaggggctcagctggcttacattgaacccctggccttcctggtactc
ccaaacctgcgcatgttggatgtgtcgcacaaccagctggactctgtggagcaagctgtg
tttgcgtcccctgacagcctgcagacgctgcttatgggggggaaccctctggtgtgcgac
tgccggctcctatggttgctgagtggccggaagccacccttgctgcagctccctgacccc
cagcctgagtgcagtgcccctgagcgcatccgtgggaaacccttgcgggacctcaaggag
ccgctggtgtcacggtatgtgacctgcaccaagccatggatcgggcccaacaccacccag
ctgctgctggcagacgaggggcagcctgtctggctcaactgcatagcagacggggctcct
cggccatccatggcctgggtgacgccacacagacgctatgtcacagccaagagcaccggg
agggtgacagtccataccaacggcaccctggagattaaggctgcggagctgcacgacaat
ggtgtgtacctgtgtgtggccagtaacgcggcgggcaatgccagcatgtcagcctcgctg
gctgtgaagagcctgggcatcagcgatagatcgctctacaccaacaagagcggtctcctg
gcggactccaatgggacctgggccaacggcaccctcctgtacaatatgacaaaccccata
gacctgaagaccatcatcatctccacagccatgggctgcctgtctttcctgggcgtggtc
atcttctgtttcctcctcctgtttgcctggagtcgtgggaagggaaggcacaagagcaac
ttcgacattgagtacgttccccgcaaatcgaatgggacagcagcggaggcaaatgagaca
agcgggcccagacgagtcaacatgaaaatgatttaa
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