Salvelinus namaycush (lake trout): 120060040
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Entry
120060040 CDS
T07522
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120060040
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120060040
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GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
C2-set_2
fn3
Ig_DSCAM-DSCAML_C
C2-set_3
Motif
Other DBs
NCBI-GeneID:
120060040
NCBI-ProteinID:
XP_038865031
UniProt:
A0A8U1EVX7
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Position
Sna15:30528737..30579081
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AA seq
830 aa
AA seq
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MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSIKRKDFANMTRLQDLTLSRNTISFIMPHAFADLENLRALHVNSNRLTQISNDTFS
GMSKLHHLILNNNQLTLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLHTLSLDH
NMIDYIPEETFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMNPSSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRYSHEMRVLE
GQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSPDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCIQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTSDSGKGTLVTNVHSQTNGAQSQGCTVSPSVSKQAMGGSGSEG
GGGGSIKAAGHAPDTLTDSSETSLPDCSTATSLVSQSWNTPGSSGSLKPKRKPAPKPSAT
ASVTPEPKIEALPNAETQNTNRNNSTALQHPPAPVSHSPLPYSRIKDTPILRRAHPRPSS
KYLTLPVEGVRAKRRYSLNDDSSKHHCYIGFNCRKLNYIQASMSCRTNGFKLAVISEIGP
EPVQDWQDQQLLYVAQQDAVADRVECCAEVQQYEDAGSPRVCIHEVIGDR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttattggaatggcagtgaaggcccagatctgt
ccgaagcgctgtgtctgtcaaatactatctcccaaccttgcaaccctctgtgccaaaaaa
ggtctcctctttgtccccccgaacattgacaggcacaccgtggagctacggctggcagat
aacttcgtcaccagcatcaagaggaaagactttgccaacatgaccaggttgcaggacctc
accctgtcaaggaataccattagcttcatcatgccacacgcgtttgctgacctggagaac
ctccgcgccttgcacgtgaacagcaaccgtctgacccagatatccaatgacacctttagc
ggcatgtccaagctgcaccacttgatcctcaacaacaaccagctgacgttgatccacctg
ggggctttcaatgacctgctggccttggaggaactcgacctgtcctacaacaacttggag
tccatcccctgggaggctatccagaggatgacgagcctccacaccctcagcctggaccac
aacatgatcgactacattcctgaggagaccttttctcttctccaaaagctcaaccgcttg
gacgtaacctcaaataagctacagaagcttcctccagatcctctgttccagcgggcccag
gttttggccacgtctgggatcatgaacccttcctcattcgcactaagcttcggcgggaac
ccactgcactgcaactgtgagctgctgtggttgaggcgcctgagtcgagaggatgatctg
gagacatgcgcatcgccgcagcacctctctggacgctatttctggtccatcccggaggag
gagttcctgtgtgaacctcctctcatcacccggtactcccacgagatgagggtgctggag
ggccagagggtggccctgaggtgcaaggccaggggggaccctgagcctgccatacactgg
atctctccagaggggaagctggtgtcgaactcctcccggacgttggtctacacgaatggc
accctggacattttgatcagcactgtgaaggacacaggatccttcacctgcatctcgtcc
aacccggcgggtgaggcacatcagactgttgagctgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgaccctggctcttcagacatctccacgtcc
accagggctggggcaaatggcagcaaccacactggagacaccaaaactagtccggataag
agagtggtcatcgctgaggccacatcctccacggcactcatcaagttcaacttccagagg
aatatacctgggatccgcatgttccagattcagtacaatggcagttatgatgactctctt
gtttacagaatgattccccccacgagcaaaaacttcttagtcaataacctggctgctgga
acgtcatatgacctgtgtgttctggccatatacgacgatggtatcacttccctcaccgcc
acccgcgtggtgggctgcatccagttcaccaccgagtctgagtacctgcgctgtcacttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggtggcatcatcgtggcc
tctgtactcgtcttcatcatcatcctgatgatccgctataaggtctgcaacaccagtgac
tcgggcaaaggcaccctggtcaccaacgtccactcccagaccaatggggcgcagtctcag
gggtgcaccgtcagtccctctgtgtccaaacaggccatgggagggtcggggtcagaggga
gggggtggagggtctataaaggccgctgggcacgcgccagacactctgacagactcgtct
gagacctctctcccagactgctccactgctacttctctggtgagccagagctggaacacg
cctggctcctcagggtctctgaagccaaagcgcaagcctgcgccaaagccctccgctact
gcttctgtcacacctgagcccaagatagaggccctccccaacgctgagacccagaacacc
aaccgcaacaactccacggctctgcagcatccccccgccccggtatcccactccccccta
ccctactcacgcatcaaggacacgcccatattaagacgcgcacaccccagaccatcctcc
aagtacctgaccttaccggtggaaggggtgagggccaaacgtaggtactctctaaacgat
gactcgtccaagcaccactgctacattgggtttaactgtaggaaactcaactacatccag
gcttcgatgtcctgcaggactaatggcttcaaactggcagtgattagtgagataggacct
gaaccagtccaggactggcaggaccagcagcttctctatgtggcccagcaggatgccgtg
gctgaccgagtcgaatgctgcgctgaggtccagcagtatgaggatgctggcagccccaga
gtctgcattcatgaggtcattggtgaccgttag
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