Salvelinus namaycush (lake trout): 120060077
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Entry
120060077 CDS
T07522
Name
(RefSeq) transcription factor HIVEP2-like
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120060077
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120060077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_16
TFIIIA_zf-C2H2
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
120060077
NCBI-ProteinID:
XP_038865069
UniProt:
A0A8U1EW25
LinkDB
All DBs
Position
Sna15:38282613..38289506
Genome browser
AA seq
1738 aa
AA seq
DB search
MEQKQQQKPGKYVCDYCGRACAKPSVLKKHIRSHTGERPYPCVPCGFSFKTKSNLYKHRK
SHAHSVKAGTVPISELGSYNANTEDRGSLEGEGELYSDAEQSSDTDDDYSSFLDSVSVEE
PDSTTAVRVLNLVAQKQGVTSTLSEERSARLPEINDAQAPAVSQVSRAIQSSAIKQRLAL
RLSEKRSSDTDTSLSLPSQGSKGSTDSGYFSRSESAEHQTGGPPNTNAKSYQEIMFGKCY
KPNPKQAITVVTCTTDLISDRKSSERGVSRVFTQEKESMIESIRINTHSFTRGEMKEAQL
ELSDSGQLVRSNSMPTSSGSCLDMPQGLRGSHSFDERASPGGIRRLRRQAAFEHSAHDGH
TELPDHYGNISEISNLGVEMEFATRKRRKEKCIREEEDAASQYHTDYDHSEEMRDYDSKQ
ASQGALTTTPSVKVHAQSVNTQDRAQCDRLHMEMLEDTTEKRTLGNVISVIQHTNSLSRS
HSDESYNYQRREKPSSMEVVEQTETRDKRTEIFAHQLSDSRLLDQSYQMTPKLVRQSNIQ
VPEIRVTVEPDSPEKEKAAEVKQVKAKEPDRYVEEFQWPQRSETLSQFPPEKLPPKKKRL
RLADLEHSSGESSFESACTSLSRSPSQDSNLSYCSSFSFDREEREREFIPKPASLAARQD
EFGKALEFLAVPGSAHSLSVLNQRQQHEMRRSSSEQAPCNSQRRELPEVRSVSFDYGSLS
PMAKVRHAGLGASYSEPRRGNLVRQASLNVDPEFTHPVLPLNILPPYLSNALSFSTTSLL
SQSLPMFAPQPPHSGLLVPVRIQAHVPSYGSITYTTVSQVVDDPYENSLTSHFAHLSTNL
DALLGHPRGLLTNPAQIQVLDLSPAKFKTGIPLTLTSRTISTTNCGSSGGSNKRMLSPAS
SLDLLMEVKQQKRVKEEKMYGEIVEELGAVELGNCNVTEESKYSLKTEFKSDTNQGASLS
GLSSISSLSVSSSHHSQDDRASGSFISPQQQGSECPDSLMDNSPTETSLHPPSLMSLNDF
KEPGMDSKAQMEMMVQLVKGQGILISDGENTKLISQFPSLRTTTVVSWCYLNYTKPNSTP
NTSPMSSVYTTWRVSSHNPNTPNLNTSATLALLRSKQKTNTWVYTMAAMYQPGTGKLVSS
SLLWRQRLELLQSKPELKELDVICHGRKVKDASCRVKAAKEDWKDLEVSSKQTAALTPTP
TQIKIFEGGFKSNEDYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHTDVRPYVCRVC
NFAFKTKGNLTKHMKSKAHIKKCLELGVSVTVDDTETQESDDIQQDSKTGILSTAKHQFS
DADDSDGMDEEIDDIDEDDDDDYDGGSTPNIRSRSTSPQPCDIASPSVTATTVTHVVSSA
LHGCTLSTFRSLPSCLTNSIVPPSCHTHTSISGKRTGPDRRTVLASSLDKEQSERERLVE
EDCSLAMLSPDQGCLFTGLLSTGWESPLREPSPSQLRYPSPRRDLSPRGRSSPRWDTSQL
RPSSPNLTPIQHLSPACMERPMSPGGVDLPGRREPSARGRQRVVLRAVSPRRGGSQHRAS
GDKTMQQAKAELVHKGGSIEMDLDQRRSTLPNLPGPSSSSCTHHNVLSHLPLHSQQQART
LLPMVPIGGIQVLRSLPSCSSDRTHLSALSHQKTELHQDSNKEGSACVAGPGAEDTVAQQ
QEKERERERPSPHQTPWDSEEEKDPVSVLTVRDPKQEEGLQTCTKAIASLRITSEEHL
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaagcagcagcagaagcctgggaagtatgtgtgtgattattgtgggagggca
tgtgccaaacccagcgtacttaaaaagcatattcgctcacatactggggagcgaccctac
ccctgcgttccctgcggcttctctttcaaaaccaagagcaatttatacaaacacagaaaa
tctcatgctcactctgtcaaagctgggacagtgccaatttcagaactgggttcttacaat
gccaacacagaggaccggggatctttagaaggagaaggagagttgtactctgacgctgag
cagagctctgacacggatgatgactattcatcgttcttggactctgtttcagtcgaggaa
ccagatagcaccactgctgtaagagtactgaatctcgttgcccagaaacagggagttaca
tcgacattatctgaggagcgttcagccaggctcccggagatcaatgatgctcaagctcca
gccgtttctcaggtcagtcgtgcaattcaatccagcgccatcaagcagcgactggcactc
cggctctcagagaaaaggagcagtgacactgacacatctctctccctgcctagccaggga
agcaaaggcagcacagactcaggctacttctcacgctccgagagcgcagaacaccaaacg
ggtggtcctcccaacacaaacgccaagtcctatcaagagattatgtttgggaagtgttac
aaaccgaacccgaaacaggccataactgttgtgacttgcactacagacttaataagtgat
cgtaagtcttcagagcgaggtgtttcccgcgtattcacacaagaaaaggaatcaatgata
gaatcgatcagaataaacacacattcatttacaaggggagaaatgaaagaggctcaacta
gagctctctgattctgggcagctggtgcggagcaactcgatgcccacgtcctcaggttcg
tgtctggacatgccacaaggcctgcgaggcagccactcctttgatgagagggcgtcccct
ggaggtattaggagacttaggcgacaggctgcctttgaacactctgcacacgatggacac
acagaacttcctgaccactatggaaacatctctgaaatttccaaccttggagtagagatg
gaatttgcgacgaggaaacggcggaaggaaaaatgtattagggaggaggaggatgcagca
agccagtatcacacagactacgaccactctgaagagatgagggactatgattcaaagcaa
gcctctcaaggtgctctaaccactactccttcagtgaaagtacatgcccaaagcgtgaat
acacaggatagagcacagtgtgatagactgcacatggaaatgttggaagacaccacagag
aagagaactttaggtaatgtcatctctgtgattcaacacacaaactccctaagcaggtct
cactctgacgagtcttacaactaccagagacgggaaaagccttcctcaatggaagtggtg
gagcaaaccgaaactcgagataaaaggactgagatctttgcacaccaattgagtgacagt
agattgttagatcaatcatatcaaatgacacctaagctagtccgccagtccaacatacag
gtcccagagatcagggtgactgtagaacctgacagtccagagaaagagaaagcagctgag
gtgaaacaggtgaaggcgaaggagcccgatagatatgtagaggagttccaatggcctcag
aggagtgaaaccctgtctcagttccccccagaaaaactccctccaaagaagaagagactg
cgcttagctgacttggagcactcttctggtgagtctagcttcgagtcggcctgtacgagc
ctctcccgaagccctagtcaggatagcaacctatcctactgctccagcttctcgtttgac
cgagaagagagagagcgagagtttatccccaagccagcttccctggcagctagacaggat
gagtttggaaaagcgttggagttcttagcggtgccaggaagcgcccactccctctctgtc
ctgaaccagcgtcaacaacatgaaatgagacgctcctcttcagaacaggcaccatgcaac
tctcagcgcagagagctcccagaggtccgaagcgtatcatttgactacggcagtctctct
ccaatggccaaagttagacatgcgggactcggcgccagttactcagaacccagacggggt
aacttggtaagacaggcgtccttgaatgttgaccctgaatttacacatccagtccttccg
ctaaatattcttcctccgtacctcagcaatgccctgtcgttctcaaccacttctctgctc
tcgcagtctctgccaatgtttgcccctcagccaccacactccggtctcttagttcctgtt
agaatacaggctcacgtgccgtcttacggtagcattacatacaccactgtgtcacaggtt
gtagatgatccatacgaaaactctctcacttctcactttgcacatttatccacaaattta
gatgcattattaggacacccccgaggactgttgaccaacccagcccagattcaagttcta
gatctgtcaccagctaagtttaagacaggcatccctctaaccctgacctccaggactatc
tccaccaccaactgtggatccagtggtggatccaacaagcgcatgctatctccggccagc
agcttggacctgttaatggaggtcaaacagcagaaacgtgtcaaagaggagaaaatgtac
ggtgagatagtggaggagttgggcgccgtggagttagggaactgtaatgtgaccgaagag
agcaagtacagtttaaagacagagtttaaaagtgacaccaaccagggagcatcactgtca
ggcctttcttctatatcctctttgtctgtgtcatcctcacatcattctcaagacgaccga
gcaagtggaagcttcatctcacctcagcaacaagggtcagaatgtcctgattcccttatg
gacaactccccaaccgaaacaagcctacatccaccctctctgatgtctctaaatgatttc
aaagagcctggcatggacagcaaggcacagatggaaatgatggtgcagttagtcaaaggt
cagggcatcctcatctctgacggtgaaaacaccaaactgatatctcagtttccaagtctt
cgcacaacgacagttgtgagttggtgctatctgaactacaccaagccgaacagcactccc
aacacttctcctatgtcctctgtgtacactacgtggcgcgtcagttcccataaccccaac
actcctaacctcaacaccagtgcaaccctggctctgctccgctccaaacagaagactaac
acatgggtgtacaccatggctgccatgtaccaacctgggactgggaaactggtctcctcc
tcactcttatggaggcagaggcttgagctgctacagagcaaaccggagctcaaagagctg
gatgtgatctgccatggaaggaaagtgaaggatgccagctgcagggtaaaagcagcaaag
gaggactggaaagacctggaggtctcctcgaaacaaacagcagcgctaacaccaacgcca
acccagatcaaaatctttgaaggagggttcaagtccaatgaggactatgtgtacgtgagg
ggcagaggccgagggaagtatatctgtgaggagtgtggcatccgctgtaagaaacctagt
atgctgaagaaacacatacgcacccacactgacgtcagaccctacgtttgcagggtctgc
aacttcgctttcaaaacgaaaggaaacctgaccaagcatatgaagtcaaaggctcacata
aagaagtgtcttgagcttggtgtgtcagtcacagtggatgatacagagacacaggaatct
gatgacatccagcaagactcgaagaccgggatcttgagcacagccaaacaccagttctca
gacgcagacgactccgatggcatggatgaagagatagatgacatcgacgaagatgacgat
gatgattacgacggtggctccactccaaacatccgctcccggagcaccagccctcagccc
tgtgacatagcctctccgtcggtcaccgctaccaccgtcacacatgttgtgtcgtcagct
ctccatggctgtaccctcagtaccttccgttctctccccagctgcctcaccaactccatc
gtgcctccatcgtgccatacccatacctccatctcaggcaagaggacagggccagaccgg
aggactgtcttggcctccagcctggacaaggagcagagtgagagagagaggcttgtggag
gaggactgtagcctggccatgctgtctcctgaccagggatgtctgttcaccggtctgctg
tccactggctgggagtcccctctgagggaaccgtccccctcccagctccgctacccatca
ccccgtagagacctctccccccggggtcgctcctcacctcgatgggacacctcccagctg
aggcccagctcccccaacctcacccccatccagcacctctccccggcctgcatggagagg
cccatgtccccaggcggagtggacctgcctgggaggagggagccatcggcccggggcaga
cagagggtggtgctgagggctgtgtctccacgtagagggggctcacaacacagagcgtct
ggcgataaaaccatgcaacaagccaaggctgaacttgtccacaagggaggatccattgaa
atggatttggatcagaggagaagcacgctccccaacctgcctggtccctccagctccagt
tgtacccatcataacgtcctcagccaccttcccctacactcccagcagcaggctcgaact
cttctccccatggtccctatcggggggatccaggtactgcgctctttgccctcctgcagc
tctgaccggacccatctgtcagccctgtcccatcagaagactgagctccaccaggacagc
aataaggagggatctgcctgtgtggcgggcccaggtgcagaggacacagtagcccagcag
caggagaaggagcgggaaagggagaggccgtccccccaccagacaccctgggactctgag
gaggagaaagatcctgtctctgtcctcacggtcagggaccctaagcaggaagagggtctt
cagacctgcaccaaggccattgcctccctcaggatcacttctgaggagcatctatag
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integrated database retrieval system