Salvelinus namaycush (lake trout): 120060078
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Entry
120060078 CDS
T07522
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04517
IgSF CAM signaling
snh04520
Adherens junction
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120060078
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120060078
04530 Tight junction
120060078
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GFIT
Motif
Pfam:
DIL
RA
PDZ
RA_2
PDZ_2
RA_3
PDZ_6
RASSF8-10_RA
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
120060078
NCBI-ProteinID:
XP_038865070
UniProt:
A0A8U1EW19
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Position
Sna15:38329559..38365455
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AA seq
1075 aa
AA seq
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LDMAGKEEWQRLADIIQHWNNTRLDLFEISLPCKNLEFHGVMRFYFEDHVAGNVATKCLR
VSSTTTTGEVIETLSEKFRPDMKMLNTPYFLFEVHANKERQLDLSEKPLDVQLNWNTDNR
EGRFVLKKDKDIIGPLSIQDNSPEKKKGGMIQNFKRTLSRKEKKKEKKKTGDDAVNHSAK
PNGSTMRKENGDQDNMDQLALPVGIKFRENSEDPFLSAVINYTNSSTVHFKLSPAYVLYM
TGRFVLHRHYSHSQETSQSHRPSEHAHRVTATVSKMVAMTEVVFQKQKSIAGAVAFWMAN
ASELLNFLKQDRDLSPITLQAQENLAHLVHKAFKCLTQCLLADLSRHLPEFLIYPEGSQS
PAEIEGVLQTLMGAMSLLRRCRINAALTIQLFSQLFHSISAWLFNRLLSPSPQGEACSLG
LRSHYWGATLRQRLSLVEDWAERQGLELAADCHLSRIIQVTMLLTMNKCSMHDSENIQNT
CFKLNSLQLRTLMTSYLYDTNEPRIPPGVIDRVVAAAEASADELLRSEGQDLQLEEGPDL
HLPFLLPEEGYSCDTVNGIPQGFREFLEPICRKGLCSLISHPHSGGTWTIFFNRANNFSA
QDANPVHLFLNISIFLPLHREPEVVTITLTKPMNSGMGVSIVAAKRAGQDNLGIYVKSIV
KGGPAEMDCRLTAGDQLLCVDGHSLVGLSQERAAGIMMHTGPVVTLQVAKQGATCHGLAA
LLDEPPSVSTTALDGSGPTSSSHAKPNGKALILYDGMEQSPGPSGLWGNNSYGGNRRQRE
QTLLKNRQLYRSNPNMISQEEAEPVDPVIPTDSKITAVSTSNLLCSDMYHREYLTLPAPR
SQDKKTVAFELPPQGPRVSFNLDGQISNKRTLMNIQQQALRRVQPAMSQLFPTQSKDTSL
QRPPAKPQPGTTPGHQDQYFSMTKEPSSEGNKSLSPDPWKRDAREKQQKQQRLQVVDLLE
QEIQDLQANAQLTPEETDRLRRLNLEWQFQQRLQEFQQNGNNDDDDEEEDDRDTPTGENV
QESNELNVNFDEKCSKEGQEENNYKGDATPENLTFKERQRLFSLGSNASIKVKAL
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
ctggacatggcggggaaggaagagtggcagagattagctgacatcatccaacattggaac
aacacccgactggacctgtttgagatcagtctgccatgcaagaacttagagttccatgga
gtgatgcggttctactttgaggaccatgttgcagggaacgttgccaccaagtgcctgcgt
gtcagcagcaccaccaccactggagaggttattgaaacactgtcagagaagttcagaccg
gacatgaagatgttgaatactccctatttcctgtttgaggtccatgctaacaaggaacgg
cagctggacctgagtgaaaagcctctggatgtgcagctgaactggaacacagacaacagg
gagggccgcttcgtactcaagaaggataaggacattattgggcctttatccatacaggac
aacagcccagagaaaaagaagggaggcatgatccagaacttcaagaggacactgtcgagg
aaagagaagaagaaggagaagaagaagacgggagatgatgctgttaaccactcggcaaag
cccaatgggtcgactatgaggaaagagaatggagatcaggacaacatggaccaacttgca
cttccagttggtattaaattcagggaaaattctgaggaccccttcctctctgcagtcatc
aactacaccaacagttccactgtccacttcaagctctcccctgcctacgtcctgtacatg
accggacgcttcgtcctccaccgccattacagccacagtcaggagacatcacagagtcat
cgcccctcagagcacgcacacagagtcaccgctactgtcagcaagatggtagccatgact
gaggtggtcttccagaagcagaagtccatagctggtgctgtagccttctggatggccaat
gcctcagagctcctgaacttcctgaagcaggacagagatctaagccccatcacactgcag
gctcaggagaacctggcacacctggtgcacaaagctttcaagtgtttgactcagtgtctg
ctggctgatctgagcagacacttgccagaattccttatttatcctgaggggagtcaatca
cctgcagaaatagagggcgtactgcaaaccttgatgggtgccatgtctctgctgcgtcgc
tgtcgaatcaacgctgccctcaccatccagctgttctcccaactcttccactccatcagc
gcctggctcttcaacaggctgctgagccccagcccccagggagaggcctgctccctgggc
cttaggtcccactattggggagccaccctccgccagaggcttagcctggtggaggattgg
gcagagaggcaaggtctggagctggccgcagactgccacctcagccgcatcatacaggta
acaatgctgttgaccatgaacaagtgttccatgcacgattcagagaacatccagaatacc
tgcttcaagttaaactccttgcagcttcgaacactgatgacaagctacctctacgatacc
aacgagccccgcattccccctggtgtgattgacagggtggtggcagctgcagaggccagt
gctgatgagttgttgcgcagtgaagggcaggacctccagctggaggaggggccagacctc
cacctgcccttcctgctccctgaggaaggctactcatgtgacacagtcaatggcatcccg
cagggcttcagagagttcctggaacctatctgccgcaaaggcctctgctctctgatctct
cacccccactctggtggcacctggaccatcttcttcaacagagcaaacaatttctctgca
caggacgcaaacccggtacacttatttttaaacatatccatatttttaccactgcataga
gaacctgaggttgtgactattacactgacgaaacccatgaacagtggaatgggggtcagc
atcgtggcggccaagagagcaggacaagacaaccttgggatttacgtcaagtctatcgtc
aaaggaggaccagcagaaatggattgcaggttaactgctggggaccagttgctgtgtgtg
gatggacacagtctcgtgggcctctcacaggaaagggcagcaggcataatgatgcacact
gggccagttgtgactttacaggttgccaagcagggggcaacatgccatggtctggctgcc
ctgctagatgaaccaccttcagtatcaactacagctttggatggtagtggccccaccagc
agcagccatgccaagccgaacggcaaggccctgatcctgtatgatggcatggagcagagc
cctgggccctcaggactatggggtaataactcctatggagggaacaggagacagagagaa
cagaccctgctgaagaacagacagctataccgctccaaccccaacatgatcagccaagaa
gaagcagaaccagttgatccagtcataccaacagacagtaaaatcactgcagtctccacc
agcaacctgctgtgctctgatatgtaccacagggaatacctgactctaccagcccctagg
tctcaggacaagaagacagtagcctttgaactcccacctcaggggcccagagtctcgttt
aatctagatggacagatctccaacaagaggaccttgatgaatatccaacaacaagccttg
aggagggtgcaaccagcgatgtcccaactgttcccaacccagtcaaaagacacatccctc
cagagacctccagccaaaccacaaccagggaccaccccaggacatcaggaccaatacttc
agcatgactaaagagccgtcatcagaaggcaacaaaagtctgtctccagacccatggaag
agggatgcacgggagaagcagcagaagcagcagagactacaggtggtcgacctgttggaa
caggagatccaggatctgcaggctaatgcccagctcacacctgaggagaccgacaggctc
cgtaggctcaacctggagtggcaatttcaacagagactccaggagttccaacagaatgga
aacaatgatgatgatgatgaagaggaagacgatagagacacgccaacaggagaaaatgtt
caagagtcgaatgaactcaacgtaaactttgatgagaagtgctcgaaagaagggcaggaa
gagaacaactacaaaggtgatgcaacacctgagaatctcacatttaaggagcgccaacgt
ctcttctccctcggatcaaacgcctccatcaaagtcaaagccttgtga
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