KEGG   Salvelinus namaycush (lake trout): 120060111
Entry
120060111         CDS       T07522                                 
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
  KO
K11800  DDB1- and CUL4-associated factor 5
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:snh04121]
    120060111 (dcaf5)
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     120060111 (dcaf5)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR41
Other DBs
NCBI-GeneID: 120060111
NCBI-ProteinID: XP_038865124
UniProt: A0A8U1GVE8
LinkDB
Position
15:complement(3209618..3232205)
AA seq 846 aa
MREVKGCGMRSSVGFLSQRRLFGNPLMKEEFQRLRLAGCTSLYKKDMLGHFGCVNAIEFS
NNGGEYLVSGGDDRRVLLWNMERALHARSAKPLKLKGEHLSNIFCLAFDSTNKRVFSGGN
DEQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTREPPHGEPF
CLANYPSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRTSLLRYGGSMSLQSAMSVRF
NSAGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDEDQYILSGSDD
FNLYMWRIPKDPEAGGPGRVVNGASMVLKGHRSIVNQVRFNPSTYMICSSGVEKVIKAWS
PYQQPECLGDLDGFVEDKSRSLYSHEEYINLVLNSGSGLSHDYVSQSIQEDPRMMAFFDS
LVRREIEGWSSDSDSDLSEGAILQLHARGRRSTRAIRDGAGVLVGSGVATPLPPAAAATA
DSDHSSSSSLAAPEASGAEHPEGVEPPQPRRRGSRYQQSVFLLDLVGEDSDSSGFWPDPM
PRPRSPSPRDNSTLSSPTSSPAGASSSSSSSTSSTSSEDEEQRRASRRQRTAARWRRMHF
PRLSSGGRPESAQALYPGGVDSCSYPKISIDEASSSSASSTELQQDQDSVQIGPHRSGSK
TGRRKSHTRPGSSPAVSLDSQDDRAEQEGLLIASLLSQDALQQRNESRAGRGGERRAALE
RMAEGLDSPEEADESDHSRWISPSSRHHSPGLNGLQHLDMTEVPVGCRGRLAPDLFESSD
SEGERDTLELKSAGTRTLVEEGEEGGSSSQRGPAQGALKRTHLGSRGQGSGEGSGGSETS
EKKFKT
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgagggaggtgaagggttgcggtatgcggtcttccgtgggctttctgtcccagagaagg
cttttcgggaacccgctgatgaaggaagaatttcagaggcttaggttggcaggatgcaca
agcctttacaagaaagatatgctgggacatttcgggtgtgtaaacgccatagagttttcc
aacaatggaggggagtaccttgtgtccggaggggatgatcgcagggtgttactatggaac
atggagagagcacttcatgcccgctcagccaagcctctcaaactgaagggagaacacctc
tccaacatcttctgtctggcatttgacagcaccaacaagagggtgttctctgggggcaac
gatgaacaggtcatccttcatgatgtagagcgaggtgagactctgaacgtgttcctccat
gatgatgcggtgtacggcctgtcagtcagccccgttaacgacaacgtgttcgccagctcc
tctgacgacggacgggtcctcatctgggacacacgggagccgccacacggagagcccttc
tgtctggccaactacccatcagccttccacagtgtgatgttcaacccggcagagccccga
ctgctggctacagccaactccaaggagggcgtggggctgtgggacatacgcaaacctcgc
acttctctgctgcggtatggcggcagcatgtccctccagagtgccatgtcggtgcgtttt
aacagcgcagggacccagctcctggcactgcgtcgcaggctacccccggtcctctacgag
ctgcactctcgcctacccagcttccagttcgacaaccagggttacttcaactcctgtacc
atgaagagctgctgcttcgcaggggatgaggaccagtacatcctgtctggatcggatgac
ttcaacctgtatatgtggagaatcccaaaggatcctgaagcaggaggcccgggtcgcgtg
gtgaacggagcgtccatggtcctaaaaggtcaccgttccatcgtgaaccaggtccggttc
aaccccagcacctatatgatctgctcctccggggtcgagaaggtcatcaaggcctggagc
ccctaccagcagccggagtgtctgggcgacctggatggttttgtggaggataagtccagg
agtctgtacagccatgaggagtacatcaacttggtcctgaacagcggtagcggcctgagc
cacgactacgtctcacagtccatccaggaggatcctcgtatgatggcgttctttgactct
ctggtgcgtcgggagatcgagggctggagttcggactcagacagtgacctgagtgagggg
gccatcctgcagctccacgccaggggacgacgctccacacgggctataagagacggcgcc
ggggtcctggttgggagtggagtcgccacgcctctaccgcccgctgctgctgctaccgcc
gactcagaccactcctcttcgtcctcattagctgcccccgaggcctcgggggcggagcat
cctgaaggggtggagccaccgcagccgaggaggcgtggcagcagatatcagcagtctgtg
ttcttattggacctggtgggagaggactctgactccagtgggttctggccggaccccatg
cctcggcctcgctctcccagcccccgagacaactccaccctctccagccccacctcctcc
cccgccggcgcctcctctagctcctcctcttccacctcctccaccagctctgaggacgag
gagcagaggagagccagtaggagacaacgtactgcagcccggtggcgacgcatgcacttc
ccccgcctgtccagtggggggcgccccgagtccgcccaggccttgtaccccgggggggtc
gactcctgctcctaccccaagatctcaatcgacgaggcctcatcctcctccgcatcctcc
acggagcttcagcaggaccaggactcggtccagattggaccccacaggagtggctctaaa
actgggagacgcaagtcgcacacccgccctggttctagtcctgcagtgtccctggacagc
caggacgaccgagcggagcaggaggggctcctcatcgcctcccttctgtctcaagacgcc
ctgcagcagaggaacgagtcccgggcagggaggggtggagagaggagggctgctttagag
agaatggccgagggcttagatagtcctgaagaggccgacgagtcggatcatagtcgctgg
atctcccctagttccagacaccacagccctgggctgaacgggctgcagcaccttgacatg
actgaggtgccagtaggctgtaggggtcgtctggctccagacctatttgaatcctcagac
tcagagggagagagagacaccttagagttgaaatcagcaggcactaggaccctggtggag
gagggggaggaggggggctcatcgtctcagagaggcccagcccagggtgcgctgaaacgg
actcacctggggtcaagaggtcaagggtcaggggaggggtcaggggggtcagagacctca
gagaagaagttcaagacatga

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