Salvelinus namaycush (lake trout): 120060157
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Entry
120060157 CDS
T07522
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120060157
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120060157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120060157
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
SR proteins
120060157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
120060157
NCBI-ProteinID:
XP_038865204
UniProt:
A0A8U1EWC2
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All DBs
Position
Sna15:complement(7385121..7391211)
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AA seq
325 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGRFPDRYGRGSQDSRRTNQPSGQPADR
NPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKN
ALEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRSHS
PKSRSPKRDYNRSRSRSHSGSPAPRAAAPGSPPPRAKETSSSSSKRPSKPSKSASPHSPP
PAQRAPSRSPSRSRGSRSPSTDSRH
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgcatatttgtcggccggttaaacccgtccgccagagagaaggacgtg
gagagattcttcaaaggatacggccgcatccgagacatcgacctcaagagaggctttggt
tttgtggagtttgatgaccctagggatgctgaggatgcagtttatgagttggatggcaag
gagctctgcaatgagagggtgaccattgagcatgctcgtgtgcgcctgcgtggtgggcgg
ggacgtggtggtgacagaggaggaggaggaggaggaggaggccgcttcccagatcgctat
ggccgtggctcccaggatagtcggaggaccaaccaaccaagtggacaaccggcagatagg
aaccccccgccgatgcgtacggagaaccgtctcatcgtggagaacctgtcatctcgtgtc
agctggcaggacctgaaggatttcatgagacaggctggggaagtcacgtttgcagacgcc
caccgccccaagctcaacgaaggagtggttgagttcgcttcttacagtgatctgaaaaac
gcccttgagaagctgtctggcaaggagatcaatggaaggaaaatcaagctgattgaggca
gcaaagaagaggggttccaggagtcgttcccgctctgagagctcttctcgttcacgctcc
cgttctcgtaaccgttccccgtcccgctccaggaccccccgtcgttccaggtcccactcc
cccaaatcccgctcccccaagagggactacaaccgctctcgttctcgttcccacagcggc
tccccagccccccgtgctgctgcccctggctccccacctcccagggccaaagagacctct
tcctcctcctctaaacggccctccaagcccagcaagtctgcctccccccactcccctccc
cctgcacagcgtgcaccttccaggtctccttccaggtctcgtggctctcgctctccgtct
acggacagccgccactga
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