Salvelinus namaycush (lake trout): 120060158
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Entry
120060158 CDS
T07522
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120060158
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120060158
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
Oscp1
DUF6809
DUF7809
Motif
Other DBs
NCBI-GeneID:
120060158
NCBI-ProteinID:
XP_038865208
UniProt:
A0A8U1EWB8
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Position
Sna2:22345990..22349726
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AA seq
398 aa
AA seq
DB search
MERITSAQPPPCMAKHHSQEMADMQGKDFPKYVYKHRKGMKRVEDSKETYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSTLLEQQQQKIIALQI
SDQRSVRSENSEEMFRSGFHVCAKEVLQYLANQGSSRDHLTPSEMISHLHKVASEVLQGP
FSPRSEEPTHKPIDSMEKPAGQMPKGKEGHPKNFVSVIQRTYPHGHGEQSGNDTDTDSGY
GGEHEKRDLKAQRSSYYGKEGELKYALAERMAGGGVKQEGAEPQAKRLKADYSEDESSSG
QVVSSHHSYMSFSQHQTPLCVPFYLIPQAAASWPMMEKCWFPGGMPFLYPGMNVSAASLS
PEKIPQNLVMSPRAGSPTLYQAPMDSPTLLQALKQAPP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaagtgcgcaacctcctccttgtatggcaaaacaccactcgcaggag
atggcagacatgcaaggaaaggatttcccaaagtacgtgtacaaacaccgaaagggaatg
aagcgcgtggaagacagtaaggagacatacaagttaccccaccgattgattgagaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttattgccagaacatctc
aaactcacaactctaggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggaacagcagcagcagaaaatcattgcattgcaaatc
agtgatcagagaagtgtccgctcagagaacagtgaggagatgttccgctctggcttccat
gtctgtgctaaggaggtcctccagtacctggctaaccaggggagcagcagagaccacctg
accccctctgaaatgatcagccacctccacaaagtagcatcagaggtgctccagggtcca
ttcagcccccggtccgaagagcccacccacaaacccatcgatagcatggagaagcctgct
ggtcagatgcctaagggcaaggaggggcaccccaagaactttgtgtctgtcattcaaagg
acatacccccacggacatggagagcagagtggcaatgacacagacactgacagcggctat
ggaggggaacacgagaaacgggacctcaaggcccaacgctcaagctactacggcaaggag
ggggagctcaaatatgctctggctgagaggatggcaggaggtggcgtcaagcaggagggt
gccgagccccaggccaagaggttaaaagctgactactcagaggacgagtcttcctctggg
caggtggttagcagccatcacagctacatgagcttctcccaacaccagacccccctctgc
gtgcccttctacctcatcccccaagcagctgcatcgtggcccatgatggagaagtgctgg
ttcccagggggcatgccctttttgtacccgggcatgaatgtctcagcagccagcttgtct
ccagagaaaatacctcaaaatttagtaatgtctcccagggcaggttccccgacactctac
caagcacccatggactcaccaaccctcctccaagctttaaaacaagcccccccatga
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