Salvelinus namaycush (lake trout): 120060227
Help
Entry
120060227 CDS
T07522
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120060227
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Vision
Opsin
120060227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
TctB
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
120060227
NCBI-ProteinID:
XP_038865317
UniProt:
A0A8U1EWG7
LinkDB
All DBs
Position
2:complement(23080800..23082777)
Genome browser
AA seq
357 aa
AA seq
DB search
MAESWGSAAYAARRQNQETTRESSFTFTNSNNTKDPFEGPNYHIAPRWVYNLSTLWMIIV
VILSVFTNGLVLVATAKFKKLQHPLNWILVNLAIADIGETLLASTISVCNQFFGYFILGH
PMCVFEGYTVSVCGIAALWSLAVISWERWVVVCKPFGSVKFDAKWAMGGIIFSWVWAAFW
CAPPIFGWSRYWPHGLKTSCGPDVFGGNEDPGVKSYMITLMITCCFFPLFVIIFCYIFVW
LAIRAVAAQQKDSESTQKAEKEVSRMVVVMIIAFCVCWGPYTCFACFAAANPGYAFHPLA
AAIPAYFAKSATIYNPVIYVFMNKQFRTCIMQLFGKAEDDGTEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagctggggaagtgctgcttatgcagccaggcgacaaaaccaagaaacaacg
agagaatcttcctttaccttcaccaacagcaataacaccaaagatccctttgagggcccc
aactaccacattgctccaagatgggtgtacaatctctcaacactttggatgatcatagtg
gtcatcctctcagtcttcaccaatggcctggtactggtggccactgcaaaattcaagaag
ctccaacaccctctcaactggatcttggtcaaccttgctattgctgacattggagaaaca
cttttggctagcaccatcagcgtttgcaaccagttttttggctacttcattctgggacat
ccaatgtgtgtctttgagggatacactgtgtctgtgtgtggtattgctgctctgtggtcc
ctggctgtcatctcttgggagagatgggtggtggtgtgcaagccctttggaagtgtcaag
tttgatgccaaatgggccatgggaggcattatcttctcctgggtctgggctgctttctgg
tgtgccccccccatctttggctggagcaggtactggcctcatggcctgaagacttcctgc
ggacctgatgtgttcggaggcaatgaggatcctggagtcaagtcctacatgattactctc
atgattacatgctgcttcttccccctgttcgtgatcatcttctgctacattttcgtgtgg
ctagccattcgtgctgttgctgcgcagcagaaagactctgagtcaacacagaaggccgag
aaggaagtgtccaggatggttgttgtcatgattatagctttctgtgtatgctggggacct
tatacctgctttgcctgctttgctgcggctaaccctgggtatgctttccaccctctggct
gccgcaattcctgcctactttgccaagagcgccaccatctacaatccagttatatatgtc
ttcatgaacaaacagttccgtacttgcatcatgcagctctttggaaaggcagaagatgat
ggcactgaagtgtctacatcaaaaacggaggtttcctctgtggcacctgcataa
DBGET
integrated database retrieval system
