Salvelinus namaycush (lake trout): 120060260
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Entry
120060260 CDS
T07522
Name
(RefSeq) histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
snh03083
Polycomb repressive complex
snh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120060260
03083 Polycomb repressive complex
120060260
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
120060260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120060260
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120060260
Histone modification proteins
HAT complexes
HATB complex
120060260
HDAC complexes
Sin3A-HDAC complex
120060260
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120060260
PRC2.2
120060260
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120060260
Heterochromatin formation proteins
Other heterochromatin formation proteins
120060260
Chromatin remodeling factors
NuRD complex
120060260
NuRF complex
120060260
NuRF complex (fruit fly)
120060260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
120060260
NCBI-ProteinID:
XP_038865361
UniProt:
A0A8U1EWI2
LinkDB
All DBs
Position
Sna15:18339775..18344660
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVNRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARHMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICMWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaagcagcgtttgatgatgctgtggaggagagggtgataaatgaggag
tacaagatatggaagaagaacacacccttcctctatgacctggtgatgacccacgccctg
gagtggcccagcctcactgcacagtggctgcctgatgtcaacagacctgaagggaaggat
ttcagcgtacacaggttggttcttggcacacacacctcagatgaacagaatcacctggtc
atcgccagcgtgcaactgcctaatgacgatgctcagtttgatgcctctcactacgacagt
gagaaaggtgagtttggaggctttggctcagtcagtggtaagatagagattgaaatcaag
atcaaccatgagggagaggtgaacagagcccgccacatgccccagaacccctgcatcatt
gccaccaaaaccccaaccagcgacgtgcttgtctttgactacaccaaacatccctccaaa
ccagatccatctggagagtgtaccccagatctgcgtttgaggggacaccagaaagagggc
tacggtctctcctggaaccccaacctgagtggctgcctcctcagcgcttctgatgaccat
actatctgtatgtgggatatcagtgccgttcctaaggagggaaaggttgtagacgcaaag
actatctttactggacacacagctgtagtggaggacgtctcctggcatctactgcatgag
tcactctttggatctgtagctgatgaccagaaactcatgatttgggacacgcgatccaac
aacacgtccaaacctagccatgctgtggacgcccacactgccgaggtcaactgtctgtcc
ttcaacccctacagcgagttcatcctggcctcgggctcagcagacaagactgtggctctt
tgggacctgaggaacctgaaactgaagctgcattcgtttgagtctcacaaagatgagatc
ttccaggtccagtggtctcctcataatgaaaccatcctggcctccagtggcacagacagg
cgactcaacgtgtgggacctcagtaaaatcggagaggagcagtcgccagaggatgctgag
gatggtccacctgaactgctgttcattcacggcggtcacacggctaagatctctgacttc
tcatggaaccccaacgaaccctgggtcatctgctctgtgtccgaggacaacatcatgcaa
gtttggcagatggctgagaacatctacaatgacgaggacccagagggagcagcagacact
gaggtccaggcatga
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