Salvelinus namaycush (lake trout): 120060456
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Entry
120060456 CDS
T07522
Symbol
foxa1
Name
(RefSeq) hepatocyte nuclear factor 3-alpha
KO
K09387
forkhead box protein A1, hepatocyte nuclear factor 3-alpha
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120060456 (foxa1)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix tissue-specific regulators
120060456 (foxa1)
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
Forkhead_N
HNF_C
Motif
Other DBs
NCBI-GeneID:
120060456
NCBI-ProteinID:
XP_038865717
UniProt:
A0A8U1EX95
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Position
Sna15:32873100..32876196
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AA seq
437 aa
AA seq
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MLGTVKMEGHETPDWSSYYNDAQEVYSPMVNNGMNAGLSSMNSMNSYMSMSTNGNMTSGS
FNMSYANPGLGAGLSPGTMTGMPPSASSAMNGMGGGVQSMGTALSPSNMGAMSAQQASMN
AMNPYASMSPTMSPMSYTQPNLNRARDNKSFRRSYPHAKPPYSYISLITMAIQQAPSKML
TLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFIKVSRSPDKPGKGSYWALHPDSG
NMFENGCYLRRQKRFKCENRKISSSKGDGMKDQSGSGSPSSENTNSKTGNVDSNSLSTSN
QSSSPHSMDHRSSSSASELKSSGPPLHPVASSATSLSSLPLPPHSMAHESHLHLKGDPHY
SFNHPFSINNLMSSSEQQHKLDLKAYEQALQYSSYGSSMSSSLPLGSASMAGRAMDPSAI
EASYYQGVYSRPVLNTS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtacagtgaaaatggaaggtcacgaaacgccagattggagcagctattacaat
gacgcacaagaggtatattcgcccatggtgaacaacggcatgaatgcaggattgagttcc
atgaacagtatgaacagttacatgagtatgtctactaatggaaatatgacctcaggttct
ttcaacatgtcttacgccaaccccggcctgggagccggactaagccccgggacaatgaca
gggatgcccccgagcgcgtccagtgcgatgaacggaatgggtggaggggtacagtcaatg
ggcactgcccttagcccctcgaacatgggcgcgatgtcggctcagcaggcttccatgaac
gctatgaatccatacgcgagcatgagccctactatgagcccaatgtcctatactcagccc
aacctgaaccgagcaagggacaacaagtcgttcaggagaagctacccgcacgcaaagcct
ccgtattcgtacatatccctcataaccatggccattcagcaagcaccaagcaagatgctc
acgcttagcgaaatctatcagtggataatggacctatttccatactacagacagaaccaa
cagagatggcagaactctattcgccattccttgtcttttaatgattgcttcatcaaagtg
tctaggtcaccggataagccaggcaaaggttcgtactgggccctgcacccagattcagga
aatatgttcgagaacggttgttacctacgcagacaaaagcgcttcaaatgcgaaaataga
aagatatcttcaagtaaaggggacggaatgaaagaccagtccggttctgggtcgccttcg
agcgagaacaccaacagcaagactgggaatgtggactccaactccctctccacctccaac
cagtcctccagccctcacagcatggaccacaggagcagtagcagcgcctctgaactaaag
agcagcgggccacctctccaccccgtggccagctcggccacgtccctgtcctctctccct
ttacctccgcactcgatggcgcacgagtcccatctgcacctaaaaggggatccccattac
tcattcaaccacccgttttcaataaataatttaatgtcatcctcagagcaacagcacaaa
ctggatttgaaagcctacgagcaagctttgcaatactcctcctacggctcaagtatgtct
tccagtctacccctcggcagcgcgtccatggctggcagagctatggacccatccgcaata
gaggcgtcatactatcaaggtgtgtattccagaccagtcctcaacacttcttag
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