Salvelinus namaycush (lake trout): 120060459
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Entry
120060459 CDS
T07522
Symbol
arid4a
Name
(RefSeq) AT-rich interactive domain-containing protein 4A isoform X1
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120060459 (arid4a)
03036 Chromosome and associated proteins [BR:
snh03036
]
120060459 (arid4a)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
ARID
120060459 (arid4a)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120060459 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Motif
Other DBs
NCBI-GeneID:
120060459
NCBI-ProteinID:
XP_038865720
UniProt:
A0A8U1EXB2
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Position
Sna15:32968786..32990153
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AA seq
1395 aa
AA seq
DB search
MKAANEPAYLTVGTEVSAKYRGAFCEAKIKTVKRMVKVKVMVKGDTTSQVVQDDQVKGPL
RVGSTVEVKSAEGICSEATINKLTDASWYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKGNRGGRRSSQAHADDDKESSSSEGDNEDRRRLNDDLMGKVA
SVQTGTERTSWYLALVISPSCNDDLTVKKDQCLVRSFADSKFHTVARKEIHEVNMDSISN
PEFSPRKGLDEAVHFLKTKVVPDSWKMDMSEILESSSSDEEDTEGKESDDDDDDDEEEEE
KEEEGKEDANDEPEDEADPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLV
YHQGGCDKIESGSVWKQIYIDLGIPVLNSAASYNVKTAYRKYLYGFEEYCRSACIVFRTI
HHSEDLPASQSQTEEKAAQIPEVKECQGPTPSVKTESAAAMEDKPAQEEAESGSESDKDV
SSPRGRRRCTVTPVKAEVKEPSKLEKIKEKEEQSGVGKTSGEETGGPRDDSRSDGGDTPG
NRRSRRLEESDKESEDEEEEELEDEEDSERRVGERGEDEDSEDSVTGTKVKVKYGRGKTQ
KIYEANIKKAENDDGGDVLYLVHYYGWNVRYDEWVKADRIIWPVDKGGTKKKQKKKVKNK
EECEKEDDKQGKLCGLKRGRPLLRTTPASANRSVSKTPSSEGRSSSKSKSDVSALPNGEG
TPRRRTRRTSGMYDSDRDSTSNEESGNSSEDSESEDSPEKKPAWAERTDPATARKQEEEE
DRRVERGRAEAAAAAAAQVAAQDQPPSSPQEKEQQEDTLPERREPEKAEEQPQVPPMTPE
PDRTKEEDPPTPKSPRSKAARRCNVREPERNTNNDTGSETPTKTTIIITTTTPNYTETES
SPCPRPLNRQDEPMVVLHCLPAEHIPSIPDLPTMDSDTDSATEEEICREERGVVKRKATE
QRTPEKKVRLDRREETTKMDSPARRPADSPARRPADSPARRPADSPARRPADSPEWRLEA
GGQRGEERLTPAKGKTEPEAKTEMPALTPEVQCQGLGEGGVAGGRPRLEQLASGVEEEVM
PQIGPEALVCHEVDLDDLDEKDKTLAEDLLMMMSQGKVHAPPPSNASSHQTHNNPPLSSG
GAAPPLCSPTSAPSPDESHSTKSESDVPIEVDSVAGESQEGLGDNESANSNCFEASTSSS
NSSMSLQERDTKDRGQKRLMDCHMSSSAKKQKRNQKRPSTTSKIDKNGAGHSSDSEDLAV
MDTSSKMTPVQHSRSKGSQKLLSPNSKELEKYKHKDKQSSFPSPRTYKWTFQLNELDSMT
SAERISFLQDKLQDIRKYYMSLKSEVASIDRRRKRLKKKEREVSHTTASTSSGSSDTGMS
PSASPTQNTVAVECR
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcaaacgagcctgcctacctgaccgtggggacggaggtcagtgccaaatac
agaggtgccttctgtgaggcaaaaatcaagactgttaaacggatggtgaaggttaaggtg
atggtcaaaggagacaccacctcgcaagttgttcaagatgatcaagtgaaaggaccgtta
agggtgggctccacagtggaggtgaagagtgcagaggggatctgcagtgaggcaaccatc
aacaaactcacagacgccagttggtacacagtggtgtttgacgatggggatgagaagaca
ctccgcaggacgtcactgtgtctgaagggagaaagacattttgctgagagcgagacgttg
gaccaactgcccctaaccaacccagagcactttggcacccccgtcatcgggaagaaggga
aaccgcggagggaggaggtcatctcaggctcatgcggacgatgacaaggagtcgtcttcc
agtgaaggtgacaatgaggacaggaggaggctaaacgatgacctgatgggtaaagtggcc
agtgttcagactgggacagagcggacatcctggtacctggccctggtgatatcacccagc
tgcaatgatgacttgacagtcaagaaagaccaatgtttagtcagatcatttgcagactcc
aaatttcacactgtggcaagaaaggagatccatgaagtgaacatggacagcatctctaac
cctgagttctcaccgaggaaagggttggatgaggcagtgcatttcctcaagaccaaggta
gttcctgacagttggaagatggacatgagtgagattttagaatcctccagcagtgacgag
gaggacacagaaggaaaggagagtgacgacgatgatgatgatgatgaggaggaggaggag
aaggaggaggagggaaaggaagatgccaatgatgagcctgaggatgaggcggacccagag
gagagggatcacttcctgcagcagctgtataagttcatggaggatcgagggacgccaatt
aacaagcctcctgtgctcggctacaaggatctgaacctcttcaagctcttcaggctagtc
taccaccaggggggctgtgacaaaattgaaagtggatctgtgtggaaacaaatctacata
gaccttggcattcccgtcctaaactctgctgcctcctacaatgtgaagactgcctataga
aagtacctgtatggcttcgaggagtactgtcgctcagcctgcatcgtcttcaggaccatc
caccacagcgaggatctgccagcttcccagtcccagacagaagagaaggctgcccagatc
cctgaggtgaaggagtgccagggcccaacaccatccgtcaaaactgagtctgctgcggcc
atggaggacaagcctgcccaggaggaggcagagtcggggagcgagagcgacaaagatgtc
tcctctcctagggggaggagacggtgcactgtgaccccggtcaaagctgaggtgaaggag
ccctcaaagctggagaagatcaaagagaaggaggagcagagtggtgtggggaagaccagc
ggagaggagactggaggtccgagagacgacagcaggtcagatggaggggacaccccgggg
aacagacgtagccgacgcctggaggagtccgataaagagtctgaggacgaagaggaggag
gagttggaggatgaggaagacagcgagaggagagtcggagaaaggggtgaggacgaagac
tctgaagactcagtaacagggactaaggtgaaggtaaagtacggtcgagggaagacccaa
aagatctacgaggcaaacatcaagaaggcagagaacgatgatggaggagatgtcctctac
ctggttcactactacggctggaacgtcaggtatgatgagtgggtcaaagcagaccggata
atctggcctgtcgacaagggcggaacaaaaaagaaacagaaaaagaaagtgaagaataaa
gaggaatgcgagaaggaggacgacaagcaggggaagctgtgtggcttgaagcgaggtcgc
cctcttcttagaaccacccccgccagcgccaaccgcagcgtctccaagacccccagcagt
gaggggcgctccagcagcaagagcaaatctgatgtatcagccctgcccaacggagagggt
acccctcgccgacgcacaagaagaacctctgggatgtatgactcggacagggattctacc
tccaatgaagaatcggggaactcgtcagaggacagtgagtcagaggattctcctgagaag
aagcctgcgtgggcggagaggacagaccccgccacggcccgtaagcaggaggaggaggag
gaccggagggtggagagaggaagagcagaggcagcggccgccgctgcagcccaggtcgca
gcccaggaccagccccccagcagccctcaggagaaggagcagcaggaggacacgctccct
gagaggagggagccggagaaagctgaggagcagccccaggtgccccccatgacccctgaa
cccgacagaaccaaggaggaggacccccctaccccgaaatcccccaggtctaaagcagca
cgtagatgtaacgttcgcgagccagagaggaacaccaacaatgacactggctctgaaacg
cccaccaaaaccaccatcatcatcaccaccaccactcccaactacactgagaccgagtca
tctccctgcccgcgccccctgaacaggcaggatgagcccatggtggtccttcattgtctc
cctgctgagcacattcctagcatccccgaccttcccaccatggactcggacacagactcg
gccacggaggaggagatctgcagggaggagcgaggtgtggtcaagcgtaaagccactgag
cagaggacgccggagaagaaggtgcgtctggacaggagggaagagacgaccaagatggac
tcgcccgccaggcggcccgctgactcgcccgccaggcggcccgctgactcgcccgccagg
cggcccgctgattcgcccgccaggcggcccgctgactcgccagagtggaggctggaggca
gggggacagagaggcgaggagcgcctgacgccagcaaagggtaaaacagagcccgaggct
aaaacagagatgcctgccctcactccggaggtgcagtgtcaaggtctaggagagggaggc
gtagcaggaggtcgacccaggttggagcagctagcctctggggtcgaggaggaggtgatg
ccccagatcggccctgaggcgctggtctgtcacgaggtggatctggacgacctggatgag
aaggacaagaccttagcagaagacctcctaatgatgatgagtcaagggaaggtccatgct
ccccctccgtccaatgcctcctcccaccagacccacaacaaccctcctctgtcctcgggg
ggcgctgctcctccactctgctcccccacctctgcccccagccctgatgagtcccacagc
accaagagtgagagcgacgtccccatcgaggtggacagtgtagccggggagtctcaggag
gggcttggtgataacgagtcggccaactcaaactgctttgaagctagcaccagctccagc
aactccagcatgtcactacaggagagggacaccaaggacagaggtcagaaaaggttgatg
gactgccatatgagttcttctgcaaagaagcagaagcgaaaccagaaacggccaagcaca
acatccaaaattgataagaacggagcagggcacagcagtgacagtgaggacctggctgtc
atggacacctctagtaagatgactccagtgcaacactccaggtctaaaggaagccagaag
ctgctctctcccaacagtaaggagctagagaaatacaagcacaaagacaagcagtcctcc
ttcccctcccctcgcacgtacaagtggaccttccagctcaatgaactggacagcatgaca
agtgctgagaggatatccttcttacaagacaaactacaggatataaggaagtattacatg
tcactcaagtctgaagtggcctccatagacaggaggcgaaagaggttaaagaagaaggaa
agagaagtgtcccacaccacagcgtcaacgtcgtccggctcgtcggacactgggatgagc
ccctctgcctcgcccactcagaacactgtggctgtcgagtgtaggtga
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