Salvelinus namaycush (lake trout): 120060461
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Entry
120060461 CDS
T07522
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120060461 (irf2bpl)
04121 Ubiquitin system [BR:
snh04121
]
120060461 (irf2bpl)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120060461 (irf2bpl)
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Atypical E3
120060461 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
120060461
NCBI-ProteinID:
XP_038865723
UniProt:
A0A8U1EXD9
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Position
Sna15:33019572..33022549
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AA seq
669 aa
AA seq
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MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEAVCRGCVNYEGADRIEFVIETARHLKRA
HGFQGGRSPGPPPPPTVKTQSAISAKETVQISHVDGPSKQQQSGMDRYSLSAERPRFDYS
SIGAHASRLPNGMSGPNGFPKPDDGPPELNRQSPNSRRSHGLAAVPGQMNVPPNLLPQTM
LNGPSSATAIAPHSLSSRPPPPSIVGPSLSMAAQSMSEQGKRPGSVSSTDQERDLKEKQR
NAEALAELSESLRNRNEDWGNKPKIVRDTLVTLSNSSPFDVRFKKDHSLVGRVFAFDAVS
KPGMDYELKIFVEYPSGSGNIFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSG
DWRLLGDLLPESVRFFKEGLGVEMLPQPYIDASCPLLPTALVNIPRALPSTSAPRTGVRK
RKASPEPDSVESALKLSEQEQQRQQWMASQSEALKLTMASGSFGASHGGPPPLGPGHSVH
SSRATPPESAPQNGQSPMAALMSVADTLGNAHSPKDNNSVHSTTSTRHNSSSPVSPASVS
GQRRLASRNGELNLAGTPSQSNAHSGMDQVHSQNIPDSPMANNGPLCCTICHERLEDTHF
VQCPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGD
VKVKKERDP
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacaagtatcttcatctcggagacagtcatgttacctgtgcgatttaccc
cgtatgccatgggctatgatttgggattttacggaggcagtgtgcaggggttgtgtgaat
tatgagggtgcggatcggatcgagtttgttatcgaaactgcacgccacctcaaacgagct
catggtttccaaggggggagatcccccggtccaccaccgccgcccacagtaaaaacacag
tcggcaatatcagccaaggagacggtgcaaatcagccatgtggatggaccctctaaacaa
caacagtcggggatggaccgctactctctgagtgcggaaagacctcgctttgactactcc
agtattggcgcccatgccagcagacttcccaatggaatgagcggtccaaatgggttcccc
aaaccggacgatggtcccccagaactgaaccgacagagcccgaactcccgtcggagccac
ggtctcgctgcggtcccaggacaaatgaacgttccccccaaccttctcccacagaccatg
ttgaatggaccctcctcggcaacagccatagccccgcatagcctgtccagccgcccccct
cctccatccattgtgggaccctctttgtccatggccgctcagtccatgtcagaacaaggt
aaacgaccaggttctgtgtcaagcactgaccaagagagagatctgaaagagaaacagcgt
aacgcagaggctttggctgagctcagtgaaagtttaaggaacagaaacgaagactgggga
aacaaacccaaaatagtaagggacactttggttactctttcaaacagctccccgtttgat
gtgagatttaaaaaggatcattcactcgtgggcagggtgtttgctttcgatgcagtgtca
aagcctggaatggactatgaattgaaaatatttgtcgagtacccaagtggatctggtaat
atattttccagcgcatcaggggtggccaaacaaatgtatcaggactgcatgaaagacttt
ggcagagggctttcctcgggctttaaatatttggagtatgagaaaaaacatggttcgggg
gactggcgactcctgggtgatttgttgcccgaatccgtccgattctttaaagaggggctg
ggggttgaaatgttgcctcagccctacatcgatgccagctgcccattgctgcccactgct
ttggtcaacatccctcgtgcattgccatctacgagtgcaccgaggactggcgtgcgtaag
cgtaaagcctccccagaacctgactctgtagagagtgcgctgaaactatctgaacaggaa
caacagaggcagcagtggatggccagccagagcgaggcgttaaaactgaccatggcatcc
ggatcattcggtgcctcacacgggggacctccgccgcttggccctggccattctgttcac
tcaagtcgcgccacaccccctgaatctgcgccccagaatggacagtctccaatggccgcg
ctcatgtctgtcgcggacacgttgggcaatgcgcactctccgaaggacaacaactctgtt
cactctacaacatccaccaggcataacagcagcagcccagtctccccagcctctgtttct
gggcagaggcgtttggcttcccgtaacggagagctcaatctggccgggactccctctcag
tccaatgcgcattctggcatggatcaggtccactcgcaaaacattccagattctcccatg
gcaaacaacggacctctgtgttgtaccatttgtcacgaacgtttagaggatacccatttc
gttcagtgtccgtcagttcccaaccacaaattctgtttcccttgttctcgagagagcatc
aaagcgcagggagcaactggcgaggtgtattgtcctagcggagagaaatgccccctggta
ggttctaatgtgccttgggcgttcatgcaaggtgagatagcaacaatattagctggggac
gttaaggtaaaaaaggagagagacccatag
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