Salvelinus namaycush (lake trout): 120060529
Help
Entry
120060529 CDS
T07522
Name
(RefSeq) EMILIN-1-like
KO
K24246
emilin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120060529
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
120060529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
ATG17_like
DUF4407
DUF1690
Baculo_PEP_C
TPR_MLP1_2
AATF-Che1
AAA_13
CENP-Q
Snapin_Pallidin
Sec10_N
Dynamitin
Tektin
Motif
Other DBs
NCBI-GeneID:
120060529
NCBI-ProteinID:
XP_038865841
UniProt:
A0A8U1EXF9
LinkDB
All DBs
Position
Sna15:40514747..40584639
Genome browser
AA seq
1108 aa
AA seq
DB search
MAGPVLFLVLWVLTWFGEVRCASYPQRYNLYSGQTQAQPQNGARAASRHRNWCAYVVTKT
VSCVVEDGVETYAKPDYHPCSWGTQCSRTVTYRTYMKPRYKVAYKMVTDMEWKCCHGYTG
DECSEGPSGGSGTQIATARPRPKPSRPGQTGTGTGHGGQNGGDGRGDGDKMRQLEDKIQS
LTKDLHDLQSTLRGMNERFQEEMHKPGFTGGGSKTPADSAQPEMKETIHSIQTKLDQLDN
RTQAHDKTLVSINNHLVNGNAGRGNDLGGGAGGSSGGTGGFSGGTLSTLKEEILRELERR
VSLSCSSCQSGVEDLRMQQQEIRERIQVLEKQLNAVDGRYRQNLDGLRQEVTRSQGCCNT
VTDLKNRVTDAETKISSVSENYNVIQNRLDKELGSGGGSHGGGGFGGGGFGPGGGGFGPN
AGSGLPKVIEDRLDSRLKDLERRVNSTVQHTEESCTLIENDLKDYFHRELGDLRTVFLDR
FDAQGYRIEDIELDVGILKDRVSDHDKKLTRLENSTALLDKSLTDCGCGGLGGGAGGVVE
DSVKSITWRVVANEDEIRRFDTRIKDLSVSGDSLMDKVVDLSHDIRKIKALTGDNGEHFN
RIVTEIETLGRCVDDCDICGRVEDELKKLKNHTQHTLNRWEKDINAIRTRVDSDQSSCSQ
VCSTLQEEVGKLQEEVEKCSGQCKIRLVTPTTGGGTGGGLDDPQKPLDGHSVIGGTSNNG
HLKSLQGELSEVILTFSSINDTLRGLEHTVQKHGSIITDLGNTKNKIISELDKIQLDVTE
HIEESRNHLDGVDRDVRRFENTLVVEMGDCKRSGDGLEKRLSKMEGVCGRLDGISDSLQK
IKEGLNKHVSGLWNCVNGLNATVISHGGVIKNIQTTQLDGIHGKIKNLNSSIGHILKDFQ
NLSEQDLTGLPGPPGPSGERGFPGLPGPKGSQGRDGPVGRQGENGPRGPPGLKGEQGMPG
ADANVPKLSFSAALTYPVLNAGTIVFDKIFVNEGEFYDPRTGIFTAPIDGRYFFSAILTG
HKNEKIEAVLSKSNYGMARVDSGGYQPEGLENKPVAEAKINPGSLAVFNIILPLQVGDTV
CIDLVMGKLAHSVEPLTIFNGMLLYEQM
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaccagttctgtttcttgtgctgtgggtcttgacatggttcggggaggttcgg
tgcgcttcgtacccgcagcggtataatctctattcgggacagacccaggcgcagccacag
aacggcgcccgggcagcgagcagacacagaaactggtgtgcgtatgtggttacaaagaca
gtgagctgtgtggtggaggatggagtggagacctacgccaagcctgactaccacccctgc
tcctggggcacacagtgctctcgcacggtgacttatcgaacatatatgaagccgcggtac
aaggtggcctacaagatggtgacagacatggagtggaaatgttgccatggttacactggg
gacgaatgtagcgaggggccgagcggagggtctgggacccagattgctacagccagaccc
cggccgaaaccttcccgaccgggtcagactggaaccggcacaggacacggaggacagaat
gggggagacgggcgaggagacggcgacaagatgcggcagctggaggacaagatccagagc
ctgaccaaggacctccatgacctgcagtccaccctgaggggcatgaacgaacgcttccag
gaggagatgcacaaaccgggtttcaccggtggcggcagcaagaccccggcggactcagcc
cagcccgagatgaaagagaccatccacagcatccagaccaaactggaccagctggacaac
cggacccaggcccacgacaagacactggtcagcatcaataaccacctggtcaatgggaat
gctggcagggggaatgatctcgggggtggcgctggcggctcctctggaggcaccggtggg
tttagtggcgggacgctcagcacgctgaaagaggagatcctgagagagctggagaggagg
gtatctctgtcctgctcctcctgccagtctggggtggaggacctgcgaatgcagcagcag
gagatcagggagaggatccaggtgctggaaaagcagctgaacgcagtggatggacgatac
cgccagaacctggacggcctacgccaggaggtcacacgctcccagggctgctgcaacact
gtcaccgacctcaagaacagggtcacagatgcagagacaaagatcagctctgtgtcggag
aactacaatgtcatccagaaccgcctggataaggagttgggaagtggtggtggtagtcat
ggcggcggaggtttcggaggaggtggctttggacccggtggtggtggctttggacccaat
gctggcagcgggttacccaaggttatagaggacaggctggatagccgtctgaaggacctg
gagaggcgggtgaacagcacagtgcagcacacagaagagagctgcaccttaatagagaac
gacttgaaggactacttccaccgtgagctcggtgacctccggactgtgttcctggaccgc
ttcgatgcccagggctaccgcatcgaagacatagagctggatgtgggcatcttaaaggac
agagtgtcggaccacgacaagaagctgacccgcctggagaactctacggcactcctagac
aagagtctgactgactgtggctgtggaggattaggaggaggagctggaggagtggtagaa
gactctgtgaagtctatcacgtggagggtggtggctaacgaggacgagatccgccgcttc
gacacacgtatcaaggacctgtccgtctcaggcgactcgctaatggacaaggtggtggac
ctcagccacgacatccgtaaaatcaaagccctgaccggagacaacggcgagcacttcaac
cgcattgtcacagagatcgagacactgggtcgttgcgtggacgactgcgacatctgcgga
agagtggaagacgagttgaagaagctgaagaaccacacacagcacactctgaaccgctgg
gagaaagacatcaacgccatccggacacgggtggactcggaccagagctcctgttcgcag
gtgtgctccaccctgcaggaggaggtgggaaaactccaggaggaggtggagaagtgtagt
ggccagtgtaagatccgccttgtgaccccaacaacaggaggcggcactggaggaggcctg
gatgacccccagaagcccctggatggccacagtgtgattggaggaacgtctaacaacggc
cacctcaagtccctgcagggcgagctgtccgaggtcatcctgaccttcagctccattaat
gacacactgaggggcctggagcacacagtgcagaaacacggcagcatcatcaccgacctg
ggcaacacaaagaacaagatcatctcggagctggacaagatccagctggacgtgaccgag
cacattgaggagagtcgcaaccacctcgacggggtggatcgtgatgtgcgccgtttcgag
aacaccctggtggtggagatgggtgactgcaagcgctctggtgacggcctggagaagagg
ctgtccaagatggagggtgtgtgtggacggctggacggcatctcggactcgctccagaag
atcaaggaggggctgaacaagcatgtgtcgggcctgtggaactgtgtgaacggcctgaac
gccacggtcatctcccacggaggggtcatcaagaacatccagaccactcagctggacggg
atccacgggaaaatcaagaacctcaattcgtccatcggccacatcctcaaggatttccag
aacctctcggaacaggacctgaccggcctgcctggtcctccaggtccctctggggaaaga
gggttcccagggttgcccggccccaaggggtctcaaggtagggacggacctgtgggcagg
cagggagagaacgggcccagaggaccaccaggtctcaaaggtgaacaaggtatgccaggt
gctgatgccaacgtgcccaagctctccttctctgcagctctcacctaccccgtgctcaac
gctggcaccatcgtcttcgacaagatctttgtcaacgagggagagttctatgacccgcgg
acaggcatcttcacagcgcccattgatggacgctacttcttcagcgccatcctgacgggc
cacaagaacgagaagatcgaggcggtgctgtccaagtccaactacggtatggcccgggta
gactccgggggataccagccagagggcctggagaacaagccagtggctgaggccaagatc
aaccctggctccctggccgtgttcaacatcatccttcccctccaggttggagacacagtc
tgcattgacctcgtcatgggcaagctggcccactccgtagagcctctcaccattttcaat
ggaatgcttctgtatgaacagatgtga
DBGET
integrated database retrieval system