Salvelinus namaycush (lake trout): 120060751
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Entry
120060751 CDS
T07522
Name
(RefSeq) aladin-like
KO
K14320
aladin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120060751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120060751
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120060751
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
PD40
Beta-prop_WDR19_1st
eIF2A
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
120060751
NCBI-ProteinID:
XP_038866090
UniProt:
A0A8U1EY00
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Position
Sna16:29858725..29878579
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AA seq
514 aa
AA seq
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MMCSLALFPRPLPGYGETSQYDESNTDPAVWFGDSHALNLYFPGESLKPHSRQESSSKAA
FRDHCETLYTRSAGAWCDAGLSGLLNEIANSSAEVPKWLEVSSSCVLALLRWVSSFHGSL
FPHLTLSSEDMTAEFSQVLDWSDCAVRSFAWHPHTQKCAVSLLDDSIKIYNPKSATTPTL
KHRLQHSVAALQWKPLCASTLAVACHNCLLVWHVDPTSFSTRPSSGCAQVLSHPGHSPVT
SMAWSPNGSLLVSASPRDTAMLVWDVAVESCVPLYRVGGGGVTYLSWSPDGSRVLAATPS
SLFRVWETRMWTCERWPCLKGRCQSGSWSPDGSRLLFSVQGETVIYALTFTDTPGMTLGM
SGGPKAATVVTDLSETTLNTPDGDMAIGGEIQSLAWDPTGERLAVLLKGDAEAGCPAMIA
VFKTQINPAFKLLPCGFVQGEAGTEPRLMQFNPNYQHGAQLTVCWSNGKITHVPFCFLSA
GNPQPGLGGSPSLPLSQGRPADYANQTLYTELIS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgttccttggctctgttcccccgtccgctgcccggctatggagagacttctcaa
tacgacgagtccaacacagatccagcagtctggtttggggattcacatgctctgaatctg
tacttcccgggggagtcactgaagcctcacagccgccaagagagcagcagcaaggcagcc
tttcgggaccactgtgagacactgtacacaaggagtgcaggggcttggtgtgatgcaggc
ctctctggactcctaaatgaaatagccaactccagtgcagaggtgcccaagtggctagag
gttagctctagctgtgtcctggctttgctacggtgggtctcctccttccacggctctctg
tttcctcatctcacattaagcagcgaggacatgaccgctgagttttcccaggtgctcgac
tggtcggactgtgcagtgcggagcttcgcctggcacccacacacccagaagtgtgctgtt
tcccttttagacgactccattaagatctacaaccccaagagtgctactactcccacccta
aagcaccgtctgcagcacagtgtggcagccctgcagtggaagcctctgtgtgcgtctacc
ctggccgtggcctgtcacaactgcctgctggtctggcacgtggaccccacctcgttctct
accagaccctcttctggctgtgcccaggtcttgtcccacccaggccactcccctgtcact
tccatggcatggtcacctaacggatctctcctggtgtcggcctctcccagggacactgcc
atgctggtgtgggatgtagctgttgagagctgtgtgcctctctaccgtgtgggaggggga
ggagtcacgtacctatcctggtcccctgatggcagtcgcgtgctggcagctacaccctcc
tccctcttcagggtttgggaaactaggatgtggacttgcgagcggtggccttgtctgaag
ggacgctgtcagtctggcagttggagtcctgatgggagtcggctgctcttcagtgtgcaa
ggagagactgtcatctatgccctaactttcactgacaccccagggatgaccttagggatg
tcaggggggccgaaggcagcaacagtcgtgaccgacctgtctgagacaaccttaaataca
ccagatggagatatggcgatcggaggagagatccagtcgctagcgtgggacccgacagga
gagagactagccgtgcttctcaaaggagatgctgaagcaggctgccctgccatgatcgca
gtgttcaagactcaaatcaaccccgcttttaagcttctgccatgtggttttgttcagggg
gaggccgggacagagcccagactgatgcaattcaaccccaactaccagcatggagcccag
ctcactgtgtgttggtctaatggaaagattacccatgtgcctttttgctttctgagtgct
gggaatccccagcccggcctgggaggcagcccctctctccccctgtcccagggcaggcca
gcagactacgccaaccagacactctacacagaactcatctcctaa
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