Salvelinus namaycush (lake trout): 120060835
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Entry
120060835 CDS
T07522
Name
(RefSeq) rab11 family-interacting protein 3-like
KO
K12485
Rab11 family-interacting protein 3/4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120060835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120060835
Membrane trafficking [BR:
snh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120060835
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4600
2-thiour_desulf
WD40_alt
Motif
Other DBs
NCBI-GeneID:
120060835
NCBI-ProteinID:
XP_038866183
UniProt:
A0A8U1EY78
LinkDB
All DBs
Position
Sna16:complement(425931..534242)
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AA seq
924 aa
AA seq
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MGFNTWVPRYMGIGEHRDAMIKHLAVEWGPSGNRAESMDAFSSIPPQRVGNKMELAHGEV
NPQGVSEKLLFPSLDQDRGQPPPLQGGETVPPENGDKGLFLGPVTDLPTVSNITSEGLPE
SSLSHNTIPFDRPSLSPEVQAGSVPLLDLEVPDCGPSLCPTHLDSPTCTGAPSDSTAEDS
EHEHTLATAILTLSDHRGEGDLSLLLNSSPLIEPLLPKVLSDRDASILDHLPSGCSSEKN
GSQDLMEDKIICDVTKHEGEEEMALDQCITSDVLRDEETLDLKPPEAIQGDGIPALQTEQ
SDGERFADLDLFARTTDCHKRDSFDCLVLDLNGSSSESGWTSEQAVENLSLSKMVGSDSM
PVVPIVNRREEDPSPLKAVFDALDQDGDGFLRIEEFMEFAAAYGADQVKDLTKFLDPSGL
GVISFEDFYRGITAISNGSTEPQLYDAHFSPGDGAVGCPEEYDEQNEVTDSAYLGSESNY
SECEMFTDEDTGALVQPEMHEDVETDSGIDATLHDPEDSHNRFSLSSELHSLSLVTVIGR
EEEHFEDFGESNTSELLLDTTEEGTDGEGDSSHLQTLDQNNCSSLLLSPSSSKRLSSKKV
ARHLRNSSMTLDSMGELSRDILDLADTDITEKVLLLERRAAELEKDSEASGEQHTRLRQE
NLQLVHRANALEEQLKEQELHAEDHLHQETRRHKDALSKLERERSLELENLQARLQQLDE
ENSELRSCVPCYRANIERLEEEKRKLEDEVEDVTERLNEELETRRKTSDKLTHERHQNQK
EKEHTQELIEDLRKQLEHLQLYKLEAEARRGLSPSAGLQEYQSRTREAELEQEIRRLKQD
NRSLKEQNDELNCQIINLSIQGAKNLMTASFSESLAAEINSVSRGELMEAIRKQEDVNFR
LQDYIDRIIVAIMESNPSMLEVKH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggggttcaacacatgggtgccaaggtacatgggcattggggagcacagggatgccatg
atcaagcacctggccgttgagtggggaccaagtggcaacagagcagagagcatggatgcc
ttctcatccatcccaccgcagcgggtcggcaacaagatggagctggcccacggtgaggta
aacccacagggtgtcagtgagaagcttttatttccatctctggatcaggacagaggccaa
cctcctcccttgcaaggtggggagactgtgccacctgaaaatggggacaaaggtttattc
ctaggacctgtgactgatctgcccacagtcagtaacattacctcagaaggtttacctgag
agcagcctctcacacaacaccatcccttttgaccgccctagcctatctccagaggttcag
gcgggatctgtgcctttgctggatctggaggttcccgactgtggccccagcctctgtcct
actcatctcgactcacctacctgcacaggtgctccatcagattcaactgcagaggattca
gagcatgaacacacgttggctactgcaatcctgactctctcagaccacagaggtgagggg
gacttgtccctccttctgaactcctcaccattgattgaacccctgttgccaaaggtactt
tctgacagagatgcttcgatcctggatcacctgcccagtggctgtagctcagagaaaaat
ggctcccaggatttgatggaagacaaaattatctgtgatgttactaaacatgagggagag
gaggaaatggctctggatcagtgcattacctcagacgtgctacgtgatgaggaaactttg
gacttgaaaccacccgaggctatacagggtgacggtattcctgctttacaaactgaacag
agcgatggggaaaggtttgcagacttggacctatttgccagaaccacagattgtcacaaa
cgggatagttttgattgcctggttctggacttgaatggttcgtcttctgagtctggatgg
acaagtgaacaagcagtggagaatctctcactctctaagatggtggggtctgactccatg
cctgtggttcccatagtgaatcggagagaggaagacccgtcacctctgaaggccgtgttt
gatgctctggaccaggatggggatggatttctacgcattgaggagtttatggagtttgct
gctgcctatggggctgaccaggtgaaggatctgaccaagttcctggatcctagtgggctg
ggggtgatcagcttcgaggacttctatcgaggaatcacggccatcagcaatggaagtaca
gagccccagctctacgatgcgcacttcagcccaggggacggagcagtgggctgcccagag
gagtacgatgagcagaacgaggtgacggatagtgcctacctgggctcggagagcaactac
agtgagtgtgagatgttcacagacgaagacacgggagccctagtccagccagagatgcac
gaggatgtggagacggacagtggcatcgacgcaacgctgcacgaccccgaggacagccac
aacaggttctccttgagctcagagctgcacagcctctccctggtgacagtgatcggcagg
gaggaggagcactttgaggactttggggagagcaacacctcggagctgctgctggacacc
actgaggaggggacagatggagagggggactcgtcccacctccagaccctggaccagaac
aactgctcctccctgctactctctcccagctccagcaagaggctgtccagcaagaaagta
gcacgacacctccggaacagctccatgacgctggacagcatgggcgaactgtcccgggac
atactggatctggccgacaccgacatcactgagaaggtgctcctgctggagcgtcgtgca
gcagagctggagaaggactcggaggccagcggggagcagcacacacggctccgccaggag
aacctgcagctggtgcaccgggccaatgccctagaggagcagctcaaggagcaagagctc
cacgctgaggaccacctccaccaggagacccgccgccacaaagacgccctctccaagctg
gagcgggagaggagcctggagctggagaacctgcaagctaggctgcagcagctggatgag
gagaacagtgagctgaggtcctgtgtaccctgttaccgtgccaacattgagagactagag
gaggagaagaggaagctagaggatgaggtggaggatgtgactgagaggctgaacgaggag
ctggaaacccgcaggaagacgtccgacaagctgacccacgaacgccaccaaaaccagaag
gagaaggagcacacgcaggagctgattgaggacctgcggaagcagctggagcacctacag
ctgtacaagctggaggcagaggccaggagggggctctcgcccagtgctgggctgcaagag
taccagagccgcacccgtgaggccgagctggagcaggagatccgacgcctcaagcaagac
aaccgcagtctgaaggagcagaacgacgagctaaactgccagatcatcaacctgagcatc
cagggagccaagaacctgatgacggcctccttctccgagtcactggcggccgagatcaac
tctgtgtcccggggagaattgatggaagccatccgcaagcaggaggacgtcaacttccga
ctacaggactacatcgaccgcatcattgtggccatcatggagtccaacccctccatgctt
gaggtcaagcactag
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