Salvelinus namaycush (lake trout): 120060870
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Entry
120060870 CDS
T07522
Name
(RefSeq) phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein-like
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
snh
Salvelinus namaycush (lake trout)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ_6
PDZ
PH
PH_10
TSKS
DUF4160
T2SSK_1st
Motif
Other DBs
NCBI-GeneID:
120060870
NCBI-ProteinID:
XP_038866206
UniProt:
A0A8U1H022
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Position
Sna16:7645293..7764785
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AA seq
1617 aa
AA seq
DB search
MEEEGKQNGVLHSTKESDLQQRLRLCVLHEILNTERDYVRVLLFLQSAFLHRIRQTAEEQ
QCLSPEHVKTLFSNIESILDVHKEVLSAVEASLQPEPQPGHALGHVFLQFKGRFSVYGEY
CSNHEKALRLLMELNKNPEIRTFLLHCMLLGGKKSTDIPLEGLLLSPIQRICKYPLLLKE
LLKRTPKKHTDYRAVEEALQAMKAVCSNINETKRQMEKLEALEQLQSHIEGWEGTNLTDI
CTELLLHGNLLKISAGNIQERVFFLFDNLLVYCKRKSRATGKKSTKRTKSINGPLYVFRG
RINTEVMEVENVEEGTADYHSNNYTVTNGWKIHNTAKNKWFVCMAKNPEDKQKWLDAILR
EREQRESLKLGMERDAYVMIAKKGEKLYHMMMTKSRHLIKDRRRKLTTVPKCFMGNEFVS
WLIESGEISKPDEGVNLGQALLENGIIHHVSDKHQFKNEPVFYRFRYDDGTYKARSEMED
IMSKGVRLYCRLHSLYNPVVKDRDYHLKTFKSVLPASKLVDWLLSQGDCSTREDAVTMGV
GLCNNGFMHHVLEKTEFKDESQFFRFYADEEMEGTSSKTKQLQRNDFKLIENILVKSLVI
HPEEEDYGFEIEEKNKAIVVRSVTRGSHAEMAGLQEGRKIFTINEDLVFLRPFQEVETMI
NQAFCIRRSLRMLVNTKTKEIVKIPDTPGALSFKLSGSAPPHVHAVRKGSEAAVAGLQPG
QCILKVNGNNMNHSDYQEVLEHFTSHHDQQDQPDMCQWVYRVFEDVEEEGGPFKACTAEK
CSDIDDENGRNGTDCRGGLSRLSLSDDTVPLVSMTVDNVHLEHGVVYEYVSTAGIKSHVL
EKMVEPKGCFSLTAKILEAFASDDSHFVRNCSQLIAQSDRVMSMPQFEFRNICDTKLESI
RRRISRYQQFAQELRKKACPTFKQAGVLTHPLGCMDFVPTNCHVNLMQVSQPKTPMVSGR
AFSFRFGRKNSFYGLDPNQANLSHMSHTQHCVTSMGAPSYSCSGLGEEEDGEGDIEGYGE
GIPDRLKQEDMEIQDAYSRLYSRLDIAVQEMRQYVTQIDALLFSITEPTQPQGSESPAYE
AIQPPSVTPEEGDQEKAEHGGIKRVCFKVTEEDQEDSGQDTMSYRDSYSECTSNRDSVLS
YTSVRSNSSYLGSDEMGSGDELPCDMSISSDKQDKLHGCLEHLFNQVDSINSLLKGPVMT
KACEETKHFHTDHTKPEFRHTEDWTVRCHIIHKNSQEDPWNLPSSIKTLVESLQRFVDDG
TNQVLLALLKCTDTALQLQRDVIFCQSAVSAVCTLAEQLLAALQAHFNNAGEYEEDCKDT
SRKWLEQAATIGVLLNFQATLAPHVKEERTMLEDTQAALLDLDKVTVFFRQLEDECLVAN
TPVCYHVEGTRQALRVTMYLDSCHFSELPTRLQNGGSLKLHTVLFTSALERPEGVSEQDY
VSIEEFQQRTNAVALERVKAYYRKLRAFYLEKSNLPTDSNTTAKKIDQLLRPLNTLDDLC
CLMKSYVNVHPNAAGHPSGVGVLCVSSELCNRLGACHITMCATGMQRCTLSVTLDQAMIL
ARNHGLMPRCIMQTMDIMRKQGTRVEISAKNLKVMDQMPPAAPRLFKLCLPPEDGDL
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggggaaacagaacggcgtcctccacagcaccaaagagtcggacctccag
caacgcttgaggctctgtgttttacatgaaatcttgaacacagagagggattacgttcgg
gtattgcttttccttcagtcggcctttttgcacagaatccgacaaactgcagaggagcaa
cagtgtctgtcacctgagcatgtcaagaccctgttttccaacatcgagtccatcctggac
gttcacaaagaggttctgtctgcagtggaggccagcctgcagccggagccgcagcctggg
cacgctcttggacacgtcttcctccagtttaaggggcggttctctgtgtacggggagtac
tgcagtaaccacgagaaggccctgcggctgctgatggagctcaacaagaaccccgaaata
aggaccttcctcctgcactgtatgctgttgggagggaagaagagcacagacattcccctg
gaggggctcctgctatcacccattcagagaatctgcaagtaccccctcttactgaaggag
ctgctgaagcggacgcccaagaagcacacagactaccgtgcggtggaggaggccctgcag
gccatgaaggcagtgtgctccaacatcaatgagaccaagaggcagatggagaaattggag
gccctggagcagctgcagtcgcacatcgagggctgggagggcaccaatctgactgacatc
tgcaccgagctgctgctccatggcaacctgctcaagatctccgccggcaacatccaggag
cgagtcttcttcctgtttgacaacctcctggtctactgcaagagaaagtccagggcaact
gggaagaaatccacaaagaggaccaagtccatcaatggccccctgtacgtgttcagagga
agaatcaacacagaggtgatggaagtggaaaacgttgaggagggaacagctgactaccac
agcaacaactacacagtgaccaacggctggaagatccacaacacggccaagaacaagtgg
ttcgtctgcatggctaagaacccagaggataagcagaagtggctcgacgccatcttgagg
gaacgggagcagagagagagtctgaagctagggatggagcgggatgcctacgttatgatt
gccaagaaaggcgagaagctctaccatatgatgatgaccaagagccgccacctgatcaag
gaccggcgccgaaagctgactaccgtgcccaagtgcttcatgggaaatgagtttgtgtcg
tggctgatagagagtggagagatcagcaagccagacgagggggtcaacttgggtcaagct
ctgctggagaacggaatcatccaccatgtgtcagacaagcaccagttcaagaatgagccg
gtgttttaccgtttccgctacgatgacggcacctacaaggccaggagcgagatggaggac
atcatgtcaaagggcgtgaggctttactgtcgtctgcatagcctgtataaccctgtcgtc
aaggatagagactaccatttaaaaaccttcaagtctgtgttgcctgccagcaaactggtg
gactggctcttgtcacagggtgattgttccacacgtgaggacgcggtgacaatgggggtc
ggactgtgcaacaacggcttcatgcaccacgttctggagaagaccgagttcaaagacgag
tcacagttctttcgtttctacgccgacgaggagatggagggtaccagctccaagaccaag
cagctgcagcgcaacgacttcaagctcatcgagaacatcctggtcaagtccctagtgatt
cacccagaggaggaagactacggctttgagattgaggagaagaacaaggccatcgtggtg
aggtctgtcaccaggggctctcacgctgagatggcggggctgcaggagggcaggaagatc
ttcaccatcaacgaggacctggtgttcctcaggcccttccaggaggtggagaccatgatc
aaccaagccttctgcatccgccgctccttacgcatgctggtcaacaccaagaccaaggag
attgtgaagattccagacactcccggtgccctgtccttcaaactcagtggctctgcccca
cctcatgtacacgcagtaaggaaagggtcggaggcggcggtggcaggactccagccaggt
cagtgcatcctgaaggtgaatggcaacaacatgaaccatagcgactaccaggaggtcctg
gagcacttcacctcccaccacgaccagcaggatcagcccgacatgtgtcagtgggtgtac
cgtgtgtttgaggatgtggaggaggaggggggcccgttcaaggcctgcacagcagagaaa
tgctcagacatcgatgatgagaacggcaggaacggaacagactgcagggggggcctgagc
cggctgtctctgtctgatgacacggtgcccctggtgagcatgacggtggacaacgtgcac
ctggagcacggcgtggtgtacgagtatgtcagtacggccggcatcaagagccacgtcctg
gagaagatggtggagcccaagggctgcttcagccttactgcgaagatcctggaggccttt
gcaagcgacgacagtcattttgtgcgtaactgcagccagctgatcgcgcagagtgaccgc
gtgatgtccatgccccaatttgagttcaggaacatctgtgataccaagctggagagcatc
cgccggcgaatcagcagataccagcagtttgcccaggagctgaggaaaaaggcgtgcccc
acattcaagcaggcaggcgtactgacccacccgctgggctgcatggactttgtgcccacc
aactgccacgtcaacctgatgcaggtgtcccaacccaagacccccatggtgtccggcagg
gccttcagcttccgcttcggacgcaagaactccttctacggcctggaccccaaccaagct
aacctgtctcacatgtctcacacccaacactgtgtgactagcatgggtgccccgtcttac
agctgcagcggtctcggggaggaggaggatggtgagggggacatcgagggctatggagag
ggcatcccagacaggctcaaacaggaggacatggagatccaggatgcatacagccgcctc
tacagccgcctggacatcgccgtgcaagagatgaggcagtacgtcacccaaatagacgcc
ctccttttttccatcacggagcccacccagccgcagggcagcgagtccccagcctacgag
gccattcagcccccttccgtgacccccgaagagggggaccaggaaaaggcggagcacggg
ggcatcaagagggtctgcttcaaggtgacggaagaggaccaagaggactcgggccaagac
accatgagctacagggactcctacagtgaatgtaccagtaacagggattccgtcttgtcg
tacacaagtgtacgtagcaacagctcttacctggggagtgacgagatgggttcaggtgat
gagctgccctgtgacatgagtatttcctctgacaagcaggacaagctgcacggctgtttg
gagcaccttttcaaccaggtggactccatcaacagcctgctcaaagggcccgtcatgacc
aaggcctgcgaggagaccaagcactttcacactgaccacactaagccagagttccgtcac
actgaagactggacggtgcgctgtcacatcatccacaagaacagccaggaggacccttgg
aacctgcccagctctattaagacactggtggagagcctgcaacgatttgtggatgatggg
acgaaccaggtgcttctggccctgctcaaatgtacagacacggctctgcagctgcagcgg
gacgtgatcttctgccagagtgcggtgagcgctgtgtgcacactggccgagcagctcctg
gcggcgctgcaggcgcacttcaacaacgctggagagtacgaggaagactgcaaggacacg
agccgtaagtggctggagcaggcggccaccatcggcgtgctgctcaacttccaggcaacg
ctggcgccccacgtgaaggaggagaggacgatgctggaggatacccaggcagccctgttg
gacctggacaaagtcacagtgttcttccgccagctggaggatgaatgcctggtcgcaaac
acgccggtgtgttaccacgtggagggcacccggcaggccctgagggtcaccatgtacctg
gacagctgccacttcagtgagctccccacgcgcctgcagaacgggggcagcctcaaactg
cacactgtgctcttcaccagcgccctggagaggccagagggagtgtccgagcaggactac
gtgtccatagaagagttccagcaacgcaccaacgccgtcgcactggaaagggtcaaagcc
tactaccgaaaactcagggctttttacctggagaagtcaaatcttcccactgactccaac
accacagctaagaagatagaccagctcctcagacccctcaacactctggacgacctgtgt
tgtctgatgaagtcatatgtcaacgtgcatcccaatgccgcaggccacccctctggcgtc
ggcgtcctgtgtgtgtcctccgagctgtgcaaccgcctgggcgcctgccatatcaccatg
tgtgctactggcatgcagaggtgcaccctgagtgtgacccttgatcaggccatgatcctg
gcacggaaccacggcctcatgccccgctgcatcatgcagaccatggacatcatgcgcaaa
cagggcaccagggtagagatctcggctaaaaacctcaaagtgatggaccagatgccgccc
gcagccccaaggctcttcaagttgtgtctgccacccgaagacggagatctataa
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