Salvelinus namaycush (lake trout): 120060884
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Entry
120060884 CDS
T07522
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120060884 (ap5b1)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
120060884 (ap5b1)
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GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
120060884
NCBI-ProteinID:
XP_038866226
UniProt:
A0A8U1EY51
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Position
Sna2:complement(28379159..28382780)
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AA seq
964 aa
AA seq
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MSANWPERISAFLRSPSQFLCITTSDIFLAEVLHELRDDRASDLIKVLLLSPLLEHPTLL
CPSVSVGEETALELMSVFAQCSPKSLPLRCHLLLALTSVLLCSCCVSSHTSASQDFLDLL
LQMAQDTNDAQAGAALHPLRTTACDCLRELEACLPGLLSQRLELLSSLRQQENSRLHQAY
TGLHALALRNAVYLLTQQKGAGAGDLKAALGSNEGFVWGEGADSAHPNSESHSDLALFSP
LTLGPMGKVPSLQTGLDCKELRSLLSSLLEESYLLTSLSQAALLRRLVEVLAMVPAVSPT
IFRAQLLRLLGTCKVCLLHTTLLMKAAFTDSLFSAEDEAFLLKRLVGLSQHPLLSTPEKL
FYMDCILHFPENRPISSGDESLPVLLTPRLAAALVPTVFNDSVSMLARLNLLSLVYLEEG
EEDREGQGGRGLAYLYDHLTSLLHIVENQASREMVVTFFRASFLFLLHFCHVERYSEDLS
QRLCDLYLRRTRLAPHLINLADRTQDRLEESGWAVALLRALQRTITEAPLSQLTLQDLRW
HLRILARVAEEGEVLQRATLNFLLCVITSSSSALCVSGDWRLGNGVLGVCRRLLLHPSLD
SLLTPLADLLQHLTCHYGETDIQDHARLYYTLLTTLSQEKLAGVLAQRGTERGRQAKVRS
LSAIMGETEELTSGLTVHQTERPLLRLVKLDKHEPDECKPEHKPDSEPACETESSPGQGG
IEDYRAQFQSSSFASEITLQYHLTHIGVHDPHFDKLFSIRLHFDLTDGHYEEVSDISVPC
LFRTRKPPTVRLRLKPKQPYHTTLRASAIFTTEDGLSWHSPLADLHVAFPEVFLPLLAPL
GWAREKKQRVFEGIWGEICSGQSEGDLTNAATSLFCDQLEDLAVGELVEKHFQRYLVSDL
DKGRCKVLFFLPPQSHVLLKVITEEDAVQVHIATDNWKLLPYINSYLEDITKEMHSTQQV
NGDV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactggcccgagaggatctccgcattcttgcgcagcccgtcccagttcttg
tgcatcacgacatcggacatcttcctcgctgaggtcctgcacgagctgcgagatgacagg
gccagtgacctcatcaaggtcctactgttgtccccgctacttgagcaccctactttgctg
tgcccctctgtctctgtgggagaggagaccgccctggagctcatgtctgtgtttgcccag
tgctcccccaaatccctcccgctccgctgccacctcctcctggccctcacctccgtgctc
ctctgctcctgctgtgttagctcacacaccagcgcctcccaagacttcctggaccttctc
ttacagatggcccaggacaccaacgacgcgcaggctggggctgcattacaccccctgagg
acaacagcctgcgactgcctgagggagctggaggcttgcctcccgggcctactatcccaa
cgcttggagctcctgagtagcctgaggcaacaggaaaactccaggcttcaccaggcctac
acggggctccatgccctggcactgaggaatgctgtgtatctgctcacccagcagaaaggg
gctggggctggagacctgaaggctgcactggggagcaacgaggggtttgtgtggggggag
ggtgcagactccgcacacccaaactctgagtcacactcagacttggccctcttctcgccc
ctcactctgggccccatgggaaaagttccttccctgcagacgggcctagactgtaaagag
ctgagatcgctactctcctccctcctagaggagtcctacctgctcacatccctatcccag
gctgccctgctgcgacggctggtggaggtgcttgccatggtgcctgcagtctccccgaca
atattcagggcacagctgctgcgtctattgggcacatgcaaggtgtgtcttctgcacacc
actctgctgatgaaggctgctttcacagacagcctgttcagcgcagaggatgaggccttc
cttctaaagcgtctcgtcggcctgtcccaacaccccctactgagcacgcccgagaagctc
ttctacatggactgcatcctgcacttcccagagaaccgaccaatcagcagtggcgatgag
agcctgcccgtgctcttgacccctcggctagccgcggccctagtgcccactgtgttcaat
gatagtgtcagtatgctggctagactgaacctactctctctggtctacctggaggaagga
gaagaagacagggagggacagggggggagaggcctggcctacctgtatgatcacctgacc
tcccttctccatatcgtggagaaccaggccagtagggagatggtggtgaccttcttcagg
gcttccttcctcttcctccttcacttctgccacgtggagcgctactctgaggacctgtct
caaaggctgtgtgacctgtacctcagacgcactcggctggcccctcacctcatcaacctg
gctgaccggacccaggaccggctggaggagtcaggctgggctgtggcactgctaagagcc
ctgcaaagaaccatcacagaggccccgctgtcccagctcaccctgcaagacctccgctgg
cacctcaggatcctggcccgtgtggcagaggaaggggaagtcctccagagggccactctc
aactttttgctgtgcgtcatcacttcctcttcatccgcgctgtgtgtgagcggggactgg
cgtctggggaacggcgtgctgggggtgtgtcgacgcctgctcctgcaccccagcttggac
tcccttctcacaccgctggctgatctcctacagcacctcacctgtcattatggtgaaaca
gacatccaggaccacgcccgcttgtactacaccctcctcaccactctctcccaggagaag
ctggctggggtgttggcacagaggggaacagaaagggggcggcaggccaaagtgcgctcg
ctgtctgccatcatgggcgagaccgaggaactgaccagcggtctgaccgtgcaccagaca
gagcgaccgctgctgaggctggtcaaactggacaaacatgaaccagatgaatgcaaacca
gagcataaaccagacagtgaaccagcctgtgagactgagagttccccaggacagggaggg
atagaggactacagagcccagttccagagttccagcttcgcctctgaaatcaccctccaa
taccacctcacacacattggagttcacgacccccatttcgacaagctcttcagcatccgc
ttgcactttgacctcacggacggccactatgaggaagtgagtgacatcagcgtgccttgc
ctgttcaggaccaggaagccccctacagtgaggctgaggctgaagcccaagcagccgtac
cacaccaccctgagagctagcgctatcttcaccacggaggacggcctctcctggcactcc
ccgctggcagacctacatgtggccttccctgaggtgtttctgcccctcctcgcaccccta
gggtgggccagggaaaagaagcagagggtgtttgaggggatctggggtgaaatatgctca
gggcagtctgagggggatttgaccaacgctgcaactagcctgttctgtgatcagttggag
gatttggctgtgggtgagctggtggagaagcactttcagagatatctggtctcagacttg
gataaaggcaggtgtaaagtgctgttcttcctcccaccccagtctcatgtgctgctgaag
gttatcacagaggaggatgccgtacaggttcatattgctacagacaactggaagcttctg
ccttatattaactcttatctagaggacattaccaaagagatgcacagcacacagcaagtc
aatggtgatgtctga
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