Salvelinus namaycush (lake trout): 120060910
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Entry
120060910 CDS
T07522
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C
KO
K03252
translation initiation factor 3 subunit C
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
snh03012
]
120060910
Translation factors [BR:
snh03012
]
Eukaryotic type
Initiation factors
eIF-3
120060910
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
DUF2779
Nop53
Motif
Other DBs
NCBI-GeneID:
120060910
NCBI-ProteinID:
XP_038866267
UniProt:
A0A8U1H140
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Position
Sna16:3890395..3932237
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AA seq
1008 aa
AA seq
DB search
MSRFFATGSDSESESSSSADEITPKAPGTTFTKQSLLLSDDEEDTKRVVRSAKDKRFEEL
TNLIKTIRNAMKIRDMSKCLEEFEQLCRAFLKSKTIVDKEGVPPFYIRLLADLEDYLNQL
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDYETEITSYKENPMASADEEEEEEEKYEAD
SGSSSDSDEVPGVAKSFLKKKPAAEVAAPPPDPSKFLKAAADKEASSSSDEDDEDWDSDT
AESGSGSEDEEGKNASMAQIFLKKPGSEAERHTSEKKKEDRKKRHRRKERLEEEAEEEAQ
EEGEGEWEKVKGGVPLVKMFAKGTEINTTVVVKKLNEILQARGKKGTDRAAQIELLHALA
NISNENNLGEGILVKIKFNIIASLYDYNPNLAAFMKADMWKTCLDCIDELLDILFNNNNI
FIGENIAEDSENLAIADAQPFRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVDNLKDEG
RVCGIIDRLLGYLETKGSTEEVCRVYLRRIMHTYYKFDYKAHRRALGLQGETKSEQDAEE
SEGEDSAFIMDRLCKFIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNI
QHADPPVQILYNRTMVQLGICAFRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQER
NAEQEKIEKRRQVPFHMHINLELLECVYLVSAMLLEIPYMAAHEFDARRRMISKQFHHQL
RVGERQPLLGPPESMREHVVAASKSMKMGDWRTCHSFIINEKMNSKVWDLFPETQCVREM
LVRKIQEESLRTYLFTYSSVYDSISMETLNEMFELELPTVHSIISKMIINEELMASLDQP
TQTVVMHRTEPTSLQNMALQLAEKLGGLVENNERIFDLKQGVYGGYFNRDQKGGYQQKQG
GYNRDGQRGGYQQKQGGYNRDGGGYQQRGGYNRDGGGYQQRGGYNRDGNRGGGGGYQGQN
RGGYQGGGGYQGGGGYQGGGGYQGGGGYQGGYRGGYKGGYQNQDRRDY
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtttctttgccaccgggtccgacagcgagtctgaatcctcctcgtcggcggac
gagatcacccctaaagcacctggaactactttcaccaagcagtcattgctacttagtgac
gatgaggaggacaccaagagagtggtgcgcagtgccaaggacaagaggtttgaggagctg
acgaacctgatcaagacgatccgcaacgccatgaagatccgagacatgtccaagtgtctg
gaggagtttgagcagctatgtcgagcgttcctcaaaagcaagactatagtggacaaggaa
ggggtgccccccttctacatccgtcttctggctgacctggaagactatttgaatcagctt
tgggaggacaaagaaggcaagaagaagatgaacaagaacaacgccaaagccctcagcacc
ctgcggcagaagatccgcaagtacaacagggattacgagacggaaatcaccagctataag
gagaacccaatggcgtcagcggatgaggaggaggaggaggaggagaaatatgaggctgac
tcagggtcgtcgtcagatagcgacgaagtgccgggagttgccaagagcttcctgaagaag
aaaccggctgccgaggtggcagcgcctccgccggaccccagcaagttcctgaaggcagcg
gcggacaaggaggcttccagcagcagtgatgaggatgacgaggactgggactcggacacc
gcggaaagtggcagtggtagtgaggacgaagagggcaagaatgcctccatggcccaaatc
ttcctgaagaagcccggtagtgaggcagagcgacacaccagcgagaagaaaaaggaggat
aggaagaagagacacaggcggaaggagcgcctggaggaagaggcagaggaagaggcccaa
gaggagggtgaaggcgaatgggagaaggtgaagggaggcgtgccccttgtcaagatgttt
gccaagggaacagagatcaacacaacagttgtggtgaagaaactcaatgagatcctgcag
gcccgtggaaagaagggaacagacagagcggcccagattgaactcctccacgctctggcc
aacatctccaacgagaacaacctgggtgagggcatcctggtcaagatcaagttcaacatc
atcgcctccctgtacgactacaaccccaacctggccgccttcatgaaggcggacatgtgg
aagacgtgtctggactgcattgacgagctgctggacatcctcttcaacaacaacaacata
tttattggtgagaacatcgcagaggacagtgagaacctggccatagccgacgctcagcca
ttcagggtgcgcggctgcattctgaccttggtggagaggatggatgaggaattcaccaag
atcatgcagaacactgacccccactctcaagagtatgtggacaacctgaaggatgagggg
cgtgtatgcggcatcatagaccgcctgctgggctacctggagaccaagggcagcacggag
gaggtgtgccgcgtctacctacgccgcatcatgcacacctactataagtttgactacaag
gctcaccgccgcgcactgggcctccagggagagaccaagtctgagcaggatgcggaggag
agcgagggtgaggacagcgccttcatcatggaccgcctgtgcaagttcatctacgccaag
gaccgcacggaccgcatccgcacgtgcgccatcctgtgccacatttaccaccacgcgctg
cactcgcgttggtaccaggcccgtgacctgatgctcatgagccacctgcaggataatatt
cagcacgccgacccacccgtacagatcctgtacaacaggaccatggtgcagctggggatc
tgtgccttccgccagggcatgatcaaggacgcccacaatgccctgctggacatccagtcg
agtggccgcgccaaggaactgctgggccagggcctgctcatgaggaacatgcaggagagg
aatgcagaacaggagaagatcgagaagaggcgacaggtgcccttccacatgcacattaac
ctggagctgcttgagtgcgtgtacctggtgtctgccatgctgctggagatcccctacatg
gcggctcacgagtttgacgcccgccgcaggatgatcagcaagcagtttcaccaccagctg
agggtgggcgagaggcagccccttctcggacccccagagagcatgcgcgagcacgtggtg
gcggccagcaagtccatgaagatgggcgactggcgcacctgccactcgttcatcatcaac
gagaagatgaacagcaaggtgtgggatctgttccccgagacacagtgtgtacgagagatg
ctcgtccggaagatccaggaggagtctctgaggacgtacctgttcacctacagcagcgtt
tatgactccatcagtatggagacgctgaatgagatgtttgagctggagctgcccacagtg
cacagcatcatcagcaagatgatcatcaacgaggagctcatggcgtccctggaccagccc
acccagactgtggtgatgcaccgtacagagcccacctccctgcagaacatggccctgcag
ctggccgagaagctgggcggcctggtggagaacaatgagcgcatctttgacctcaagcag
ggcgtgtatggtggctacttcaacagagatcagaaaggtggctaccagcagaagcagggt
ggttacaacagagatggtcagagaggcggctaccaacagaagcagggaggttacaacaga
gatggcggcggttaccaacagaggggcggttacaaccgagatggaggcggttaccaacag
aggggcggttacaaccgagacggaaacagaggaggtggtggtggctaccagggccagaac
aggggaggctaccagggaggcgggggctaccagggaggcgggggctaccagggaggcggg
ggttaccagggaggtgggggctaccagggaggctacagggggggctacaaagggggctac
cagaaccaggataggagagactactga
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