Salvelinus namaycush (lake trout): 120060993
Help
Entry
120060993 CDS
T07522
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00512
Mucin type O-glycan biosynthesis
snh00514
Other types of O-glycan biosynthesis
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
120060993
00514 Other types of O-glycan biosynthesis
120060993
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120060993
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
120060993
Glycosyltransferases [BR:
snh01003
]
Glycan extension
Type 3 chain
120060993
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
120060993
NCBI-ProteinID:
XP_038866384
UniProt:
A0A8U1GXQ7
LinkDB
All DBs
Position
16:complement(13677264..13681453)
Genome browser
AA seq
406 aa
AA seq
DB search
MKCLSASRFCFYLGFVVGTLSLYLFLRQLWFERSMELPVLGGVQGSSVAAVAEEKQASVE
RAALVNLNVPHHTGEYSRVADELYQKVRILCWVMTGPSNLQTKARHVKATWSRHCNVVVF
MSSVDDPDFPTVGLGTGEGRDQLYWKTIRAFHYALEHHGNEADWFLKADDDTFVVVDNLR
WVLSNHTPEEPLYFGKRFKPYAKQGYMSGGAGYVLSKEALRRFVEGFKSKVCTHTTSVED
LALGQCLEKMGVLAMDSRDTLQRETFHPFVPEHHLTGKFSKSFWYWNYCYYPIVEGPQCC
SDLAVSFHYVDAELMYTLEYWTYHLRAYGYRYRYRPPLPQDLVERLAQSEGATVGAAGRG
TVPAGIIVVGGGDQSKIEAVSYEGAASGSKIPMDNNRTAVTQERQQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtctgagtgcctccaggttctgcttctacttgggttttgtagtggggaccctc
agcctgtacctcttcctgcgccagctatggtttgagaggagcatggagctccctgtgctg
ggaggggtccagggcagctcagtagcagcggtggcagaggagaagcaggccagtgtggag
agagcagccctcgtcaatctcaacgtcccgcaccacacaggtgagtacagtcgcgtggca
gatgagttgtaccagaaggtgcgcatcctgtgctgggtgatgacaggccccagtaacctg
cagacaaaggcccgccatgtcaaggccacctggagccgccactgcaacgtggtggtcttc
atgagctctgtcgacgacccagacttccccaccgtagggctggggacaggggagggccgc
gaccagctctactggaagaccatccgggccttccactatgccctggagcatcatgggaac
gaagccgactggttcctcaaggcagatgacgacaccttcgtagtggtggacaacctccgc
tgggtactgtccaatcatacacccgaggagcccctctacttcggcaagcgcttcaagccc
tacgccaagcaggggtacatgagtggcggagcggggtatgtgttgagtaaggaggccctc
aggaggttcgtggaggggttcaagtccaaggtgtgtacccataccacctctgtggaggac
ttggctctgggacagtgtctggagaagatgggggttctggccatggactcgagggatacg
ttgcagcgggagacgtttcatccattcgtaccggaacaccacctgactgggaagttctcc
aagagcttctggtactggaactactgctactaccccatcgtagagggtccccagtgctgc
tcagacctggcagtatccttccactatgtggacgcagagctgatgtacacgctggagtac
tggacctaccacctccgtgcctacggctacagataccgctacagacctccactaccgcag
gacctggtggagcggctggcccagtcggaaggggccactgtgggggcagctggtagaggg
acagtcccagctggtattattgttgttggtggtggagaccagtccaaaatagaggcagtg
tcatatgaaggggctgcgagtggaagtaaaatccccatggacaataacaggacggcagtc
acacaggagagacagcagtga
DBGET
integrated database retrieval system
