Salvelinus namaycush (lake trout): 120061038
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Entry
120061038 CDS
T07522
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120061038
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120061038
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120061038
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
120061038
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Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120061038
NCBI-ProteinID:
XP_038866462
UniProt:
A0A8U1H1F9
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Position
16:14618067..14649275
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AA seq
504 aa
AA seq
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MFDCMEALGMGPRQLYDVTSRGTCMLRKASPFFAGLDPFAWTGSASVQSVETQSTSSEEM
VPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQ
INKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEELVPPESYELSGELEELVNK
VSKAHKDTFPSLLQLGKYHTNSSAEQRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFT
TLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF
AFAGQLLPLEMDDTETGLLSAISLISGDRMDLEEPQKVDKLQEPLLEALKIYARRRRPNK
PHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFEDQTESSGES
SPPPAPPAAPPASTKPPTTMKTEAEDEEDSWGTENGSEPSPEEEDEDDYDDGEEEDRGSD
SEGESWALESSSEGDRKSHAGRAQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggaagctctggggatgggcccacgccagctttatgatgtcaccagc
cggggtacgtgcatgctgcggaaggcgagccccttcttcgcgggcctggaccccttcgcc
tggaccggcagcgccagcgttcaatcggtggagacccagagcaccagctcagaggaaatg
gttcccagctctccctctccacctcccccgccacgcatctacaagccctgcttcgtgtgc
caggacaagtcctccggctatcactacggggtcagctcctgtgagggctgcaagggtttc
ttccgacgcagtatccagaagaacatggtgtacacctgtcaccgagacaagaactgccag
atcaacaaggtcaccaggaaccgctgccagtactgccgactgcagaagtgctttgaggtc
ggcatgtccaaggaagcagtgcgtaacgacaggaacaagaagaagaaggacgtgaaggag
gagttggtgccgccggagagttatgagctgagtggcgagctggaggagctggtcaacaaa
gtcagcaaggcccacaaagacaccttcccctcactgctgcagctgggcaaataccacacc
aactccagtgcagagcagcgcgtgcagctggacctggggctgtgggataaattcagtgag
ctctccaccaagtgcatcatcaagatcgtggagtttgccaagcgcctccccggcttcacc
accctcaccatcgctgaccagatcaccctcctcaagtcagcctgcctggacatcctgatg
ttgaggatctgcacgcgctacaccccagagcaggacaccatgactttctccgacgggctg
accctgaaccggacccagatgcacaacgcaggcttcggcccgctcacagacctggtgttt
gccttcgctggccagctgctgcctctggagatggacgacacagagacgggcctcctcagc
gccatctccctcatctctggagatcgtatggacctggaggagccccagaaggtggacaag
ctgcaggagcccctgctggaggccctgaagatctacgctcgtcgcagacgccccaacaaa
ccacacatgttcccccgcatgctgatgaagatcactgacctcagaggcatcagcaccaag
ggtgctgagagggccatcactctgaagatggagatcccaggccccatgcctcctctgatc
agagagatgttagagaacccagaggccttcgaggaccagacagagagcagtggagagagc
tccccaccgcctgcccctcctgccgctccaccagcctccaccaagccccccaccaccatg
aagactgaggccgaggacgaggaggacagctgggggacagagaacggaagtgagccctcc
ccagaggaggaagatgaggatgattatgatgatggggaggaagaggacaggggctcggac
agtgagggggaatcctgggctctggagagtagcagcgaaggggataggaagagccatgct
gggagggcgcagtga
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