Salvelinus namaycush (lake trout): 120061050
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Entry
120061050 CDS
T07522
Name
(RefSeq) LIM domain and actin-binding protein 1-like isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120061050
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120061050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
120061050
NCBI-ProteinID:
XP_038866481
UniProt:
A0A8U1EYN2
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Position
Sna16:15011927..15025677
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AA seq
725 aa
AA seq
DB search
MAVTPFSRRQWASQSLRVTATELSIVGTRGKNNAIAERFSKYQLAAEEANLERKKAAAEP
SPQTFRSCNLSVLKKLWEQPVQSATPYAPLPHTRRLLPSDPNAKHQIQTQATQAQPPLSP
DPNTSPTAAEDQAGPGMERRRQQRDREGQEGGAAAEVPCVPSEKPDIPLNNLKMMFEKGE
NLQHKVSREPVRIGGTGGITDNMDQLLGDAGSIESMPLKDRMAMYQAAVSKTEVLSSSVS
SDQLDSDLYSKQKENVPPGSVDTGPDSEPNSRKASSTESNASSSTGTSSASSTQKDQAQP
KTSRSFCLPARESCVSCQKTVYPLERLVANQKVYHNTCFRCSHCNTKLSLGTYASLHSHV
YCKPHFCQLFKAKGNYDEGFGLRPHKELWETKGESGTGEQPRTEPTTKATSFSKDKLKKC
ASTGTLLFSPAVEESQPAKVNVVTASLETCAQSSTEKDKPVETRRLKISWPPRTEGDGEG
GNIGASPTSDGSSTGKQSRAKWPPEDDSAFTDQSPESTVRSTLCRSASLKERSRPFSLAM
ASHAPALAASQTANPEPLERGCSFEDREPELACSPEEQGMEDQEQPNSLSPDYHTPSDDS
YVDIHTSSEDEGMEGRVARLKDHHELLEANHEQGTKNDGEEEEEEEKLEGEEEGAGKEGE
GSPSQNCQTGSSEIAAPPSSLETEPRSKTSRTSQDVGFWNGEEAVSVEEMIKRNRYYEED
EEDED
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcactccgttcagtcgcagacagtgggcctcccagtccctcagagtcacagct
acggaattgtccatagtcggcaccagaggaaagaacaatgccatcgctgagcgcttctcg
aagtaccaactggctgcagaggaagccaacttggagaggaagaaagccgctgcggagccg
tcgccacagactttccgcagttgcaacctgagtgtgttgaagaagctttgggagcagcct
gtccagtcagccacaccttatgccccgctaccccacactcgccgcttactcccctcagat
cctaacgccaagcaccagatccagacccaggcaactcaggcccagccacctctctcacca
gaccccaacaccagtcccacagccgcagaggaccaggcaggaccaggtatggagaggaga
cggcagcagagagaccgagaggggcaggagggaggagcagcagcagaagtgccttgcgtc
cccagtgagaagcccgacatacccctcaacaacctcaagatgatgttcgagaaaggagag
aaccttcagcacaaagtgtccagagagcctgtgaggattggagggaccggaggcatcact
gacaacatggatcagctacttggagatgcagggagcatagagtccatgcccctgaaggac
aggatggccatgtaccaggctgctgtgtctaaaacagaggtgttatcctcctcagtcagc
agtgatcagctggactctgacctctacagcaaacagaaggagaatgtacccccaggcagt
gtggacacgggtccggactcagagcccaacagtaggaaagcatcttccacagagagcaat
gcaagctccagtaccggcacctcctctgcatcctcgactcagaaggaccaagctcagccc
aagacctccaggagcttctgcttgcctgcacgggagagttgtgtgtcatgtcagaagaca
gtctaccctttagagcgtctggtagccaaccaaaaggtctaccacaacacctgtttcagg
tgctcccactgcaacaccaaactcagcctggggacctacgcctctctgcacagccacgtc
tactgcaagcctcacttctgccagctgttcaaggccaagggcaactacgacgagggcttc
ggcctgcgccctcacaaggagctgtgggagaccaaaggagagagtgggactggggaacaa
cccaggacagagccgactaccaaggccacctccttttccaaagacaagctgaagaagtgc
gcctctactggcacgctgttgttcagtccagcggtagaggagtctcaaccggccaaggtc
aacgtggtgacggcctccctggagacctgcgcccagagctcaacagagaaggacaagcca
gtggaaacacgtcggctcaagatctcctggcccccccgcactgaaggagacggagagggg
ggtaacattggggccagccccacctcagacgggagctccactgggaaacaatcccgtgct
aagtggcccccagaggatgactcagccttcaccgaccagagcccagagtccaccgtacgc
tccaccctctgcaggagtgcctccctcaaggagcgtagccgacccttctcattggccatg
gcctcccatgctcccgctcttgctgccagtcagacagccaatcctgagccacttgagagg
gggtgctcattcgaggacagggagcctgaactggcctgtagccctgaggaacaaggcatg
gaggaccaggaacaaccaaacagcctgtcacctgactaccacacgccttctgacgacagc
tacgtggacatccacaccagctctgaggacgaggggatggaggggagagtcgcacgtctg
aaagaccaccacgaattactagaagcaaaccatgaacagggaacaaagaatgacggggag
gaagaagaggaagaggaaaagctggagggagaagaggagggagcaggaaaagagggggaa
gggtcaccttctcaaaactgccagactggctcgtcagagattgccgcgcccccctcatct
ctggagactgagccgaggtccaagaccagccgcacgtctcaggatgtgggattctggaac
ggcgaggaggccgtgtctgtagaggagatgattaagaggaaccgctactatgaggaagat
gaggaagacgaggactga
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