Salvelinus namaycush (lake trout): 120061102
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Entry
120061102 CDS
T07522
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2-like
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04148
Efferocytosis
snh04218
Cellular senescence
snh04310
Wnt signaling pathway
snh04370
VEGF signaling pathway
snh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120061102
04370 VEGF signaling pathway
120061102
04020 Calcium signaling pathway
120061102
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120061102
09143 Cell growth and death
04218 Cellular senescence
120061102
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120061102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120061102
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
120061102
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Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
120061102
NCBI-ProteinID:
XP_038866579
UniProt:
A0A8U1GY29
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Position
Sna16:complement(15881696..15969970)
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AA seq
912 aa
AA seq
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MNSFYDGKNPSELGLEEELSQVNCQDELEFDYLFEYEPPCDNFPVEDQDEPNLSSQRVSP
PSGLAYIQEEASHYSIKCSEHNPESLSGYEHLEAKNYLDHSRLGGIALSPRIEITPSREH
YSDGRDSLQNHTLNISPRPTLTVPGHESLAYREPQCLSPASSNSSTSWHSESYSPWASPC
VSPSSGQTGAGDLCPRFQNIHTGSPRTSPGTSPRTEEGCLGPRSPSPSLRPGSRSASPQG
KRTYDMYRNPNLITGIYSRSLSPHRGHEEHPQQNAGAHYGTSNSLAEAMNGYGTVQPGLV
PTKIVKTANQTYAFYPENHREVNYLVSCEQDVKNKTGAESFFVIPPIWTKQMVPNLCSIP
VSSLPPLEWPVPSRTEQYKLHVDVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLHGYRG
KEPLGLQIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIINSTKVLEIPLEPKNDMK
AIIDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPQPNGQHISLQTASHPIECS
QRSAHELPMVDKQDMDSCSVLGGQQMILTGQNFSSDSKVIFMEKTHDGQQIWEMEATVDK
DKCQPSLLFVEIPSYRDLSICHSAKVNFYVINGKRKRSQPQHFTFTPLAVPSIKTEPVDD
YPFSMTQIMGVSPQSYYHHSPGSRGIIHPDNGLVSSMASCQQVRSGLPTPVPDTCFQQQS
PAIVYSRGGKSLSGSPGGLYQQTGGMRVMPDTHRSVLVHTGSPAQSSPLGAQQHGGGQGQ
HPSIIQFSPNNQHLLRGSDPPPLQPDNHQHIIYCDGYPQQSGAQAHSPISAHSPQHYPTT
VIQQQPYVPKAVPKGRSSPGGMEAQRCPPGEEQRASLPGGRVTVKEENLDQMYLDDEFEC
GQAEAGCVFRHA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgttttacgacggaaaaaaccctagtgagttagggttggaagaggaactgagt
caagtgaactgccaagatgagttggagtttgactacctgtttgaatacgaaccaccttgc
gacaactttcccgtggaagatcaagatgagccaaatctctcctcacagagagtcagccct
ccatctggtctggcctacatccaggaggaggcttcccactacagcattaagtgtagtgag
cacaacccagagagcctctctggctatgagcacctggaagccaaaaactacctggaccac
tccaggcttgggggcattgccctgagccccaggatcgagatcacaccgtcacgtgagcac
tacagcgatggacgagattccctgcagaaccacactctgaacatcagcccccgtcccacc
ctgaccgtcccgggccacgaaagcctggcctaccgcgagccccagtgcttgagcccagcc
tccagcaactcctccaccagctggcactcggagagctactccccctgggcctctccctgc
gtgtcccctagtagtggccagaccggggccggggacctctgcccccgcttccagaacatc
cacaccggctccccccgcacctccccgggcacctccccccgcaccgaggagggctgcctc
ggcccccgctcgccctccccatccctcaggccaggatcccgctccgcttccccacagggc
aaacgtacctacgacatgtacaggaaccccaacctgatcaccgggatctattcccgcagt
ctctccccccataggggccatgaggagcatccccaacagaacgcaggggcccactatggg
acctccaacagtctggctgaggccatgaacggctacggcactgtccagcctggtctggtc
cccaccaagatagtgaagacggccaaccagacgtatgccttctacccagagaaccacagg
gaggtcaactacctggtgtcctgtgagcaggatgttaagaataaaactggggccgaatcc
ttctttgtgatccctcccatctggaccaagcagatggtccccaacctctgcagcatccca
gtgtcttctctgccccctctggaatggcctgtccccagccgtacagagcagtacaagctc
cacgttgacgtgcagcccaagccccaccaccgagcccactatgagacagaggggagcagg
ggcgcggttaaagcccccactggtggtcatcctgttgtccagttgcatggctacagggga
aaggagccactgggcctgcagatcttcatcgggaccgcagacgagaggatcctgaagccc
cacgctttctaccaggttcaccgcatcacgggcaagacggttaccaccaccagctacgag
aagatcatcaactccaccaaagtcctggagatccctctggagcccaagaacgacatgaaa
gcaataatcgactgtgctgggatcctgaagctcaggaatgctgatattgagctgaggaag
ggcgagacagacatcggacgaaagaacactcgtgtgcgtctagtgttccgtgtgcatata
ccccaacctaatgggcaacacatctcactgcaaaccgcctcccatcctattgagtgctcc
cagcgttccgcccatgagttgcccatggtggataaacaagacatggacagctgttctgtc
ctgggaggtcagcagatgattctgacgggacagaacttcagctccgactccaaggtcatc
tttatggagaaaacccatgatggacagcagatttgggagatggaggcaactgtagacaaa
gataaatgtcagcctagtctgctgtttgttgagatcccctcctatcgcgacctgtccatc
tgccattccgccaaagtgaacttctatgtcatcaacggaaagaggaagcgcagccagcct
cagcacttcacattcactccactggcagtcccgtccattaaaacagagcctgtggatgac
tatcctttctccatgacccagattatgggtgtgtccccccagtcctactaccaccacagc
cctgggtcccgtgggatcatccacccagacaacggcctggtctccagcatggcctcctgc
cagcaggtccgctccggcctccccacccccgtcccagacacctgcttccagcagcagagc
ccagccattgtgtactcccgtgggggcaagagtctgagcggcagtcccggggggctctac
cagcaaactggggggatgcgggtgatgcccgacacacaccgttccgtcctggtccacacg
ggctccccagcccagtcgtccccgctgggggcccagcagcatggagggggccagggccag
cacccctccatcatccagttctcccccaacaaccaacacctgctccggggaagcgaccct
ccacctctccagcctgacaaccatcagcacatcatctactgtgatggctaccctcagcag
tctggagcccaagctcactcccctatctcggcccactccccccaacattaccccaccaca
gtgatccagcagcagccctatgtgcccaaggcggtgcccaagggcaggtcttcccctggt
gggatggaggcccagagatgcccccctggagaggagcagagagccagcctccctggagga
cgggtcacagtcaaggaggagaacctggatcaaatgtaccttgatgacgaatttgagtgt
ggccaggctgaggcaggatgtgttttccgacatgcataa
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