Salvelinus namaycush (lake trout): 120061239
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Entry
120061239 CDS
T07522
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08538
farnesoid X receptor beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120061239
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120061239
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120061239
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
120061239
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120061239
NCBI-ProteinID:
XP_038866826
UniProt:
A0A8U1EZE9
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Position
Sna16:26317541..26328251
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AA seq
492 aa
AA seq
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MREWSESEITMSAGGYLSASDGYGITEPLQYYDVLGDPLGYPFQEPDLQGLAFSQQQYSP
INVQFSVYGPPSSQPFHPLSTHPYSPHCLDTPCEPSPEPQCGSLGKGRGGGGLSLVKRTR
LGPGGRVRGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGGCEMDM
YMRRKCQDCRLQKCRAVGMLAECLLTEVQCQSKRLRKGTKHRGGGPEEEENMGSRRVSST
SKLPGQVVSANLSVEQKHVLDRMVEAHRQYSAQDTTHYRVFEWTCTEVGGDRLTDMACPP
SQRLLQFAKSVPGFELLDCLDQNTLLSSSSVEVMFLLSAQQFTQNPAASSPALQPFNIST
HHWLKTLESKENIHSGTGPVNSGVNEDLLGPVLNFFHSMAALGVTEAEYALLTATALLCS
ADEALLRAVACVESLQELTMELLSRVCGARYGAQGPQGAQRFARLLGRLTELRTLRHNHL
TLLRQQLWDSQP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggagtgagtcggagataaccatgtctgccggtggttacctctctgcctct
gatggatatggcatcactgagcctctgcagtactacgatgtgctgggggaccctttgggc
taccctttccaggagccagacctacagggcctagccttcagccagcagcagtacagcccc
atcaatgtgcagttttctgtctacggaccgccgtcctcccagcccttccacccactttcc
acccacccctacagcccccactgcctggacactccctgcgagcccagcccagagccccag
tgtggaagcctggggaaggggcgaggtgggggaggtttgtccctggtcaagaggaccagg
ctgggtccgggaggaagggtgaggggccaggatgagctgtgtgtggtgtgtggggacaaa
gcctctggctaccactacaacgccctcacctgtgaaggctgcaaaggtttcttccgaagg
agtgtgacgaagaaagcagtgtaccggtgtaaaagtggcggaggctgtgagatggacatg
tacatgcggagaaagtgccaggactgccgcctgcagaaatgtcgtgctgtgggcatgctg
gctgaatgtctgctgacggaggtgcagtgccagtccaagaggctgaggaaggggaccaaa
cacagaggaggagggcctgaggaggaggagaacatggggagcaggagagtcagctccacc
agcaagctaccaggacaggtagtgtctgcaaatttgtcagtagaacagaagcatgtgctg
gacaggatggtggaggctcatcgacagtacagtgcgcaggacactacacactatagggtg
tttgagtggacttgtacagaggttggtggagacagactaacagacatggcatgccctccc
tctcagaggctgctgcagttcgccaagagtgtacctggctttgagctcctggactgcttg
gaccagaacacccttctctctagttcatctgtggaagtcatgtttctgctatcagctcag
cagttcacccagaacccagcagcctctagcccagcactacaacctttcaacatctcaact
catcattggctgaaaaccttagagtccaaggaaaacattcatagtgggaccggccctgta
aactcaggagtcaatgaggacttgctaggaccggtgctcaacttcttccacagcatggct
gcattgggggtgacggaggctgaatatgccctgctcactgctacagcactgctatgctca
gcagacgaagcgttgctgcgggcggtggcgtgtgtggagagcttacaggagctgaccatg
gagcttctgtccagggtgtgcggagcccgatatggagcccagggccctcagggagcccag
cgtttcgctcgcctgctggggagactcacagagctgcgcacgctacgacacaaccacctc
accctgctccgacagcagctctgggacagtcagccttga
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