Salvelinus namaycush (lake trout): 120061254
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Entry
120061254 CDS
T07522
Name
(RefSeq) polycomb group protein ASXL1-like isoform X1
KO
K11471
additional sex combs-like protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120061254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120061254
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120061254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
120061254
NCBI-ProteinID:
XP_038866859
UniProt:
A0A8U1EZM8
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All DBs
Position
Sna16:complement(26866191..26883339)
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AA seq
1602 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKSSTEAETAEASTLATANAATAGPTE
GAEQESCDSMEIVAASGENDASIDESSSSASCSTEPQTRLSRSGVSGQVRSEAQAQTRLS
RSRQSSRQRKKAVMMPRVVLTPLKVNGEHVPSGAAGRRREDSRGGPGPTLRARPELASWK
RPQHFKSLRGYHSGPMKRSRGGVEVDFETPGSILVNTNIRALINMRTFSAFPAHSQQQLL
QLLPEVDRQVGPDGLARLSNSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEK
KVEAWKEKFFEEYHGQKSGLTREESLKLTMSEAADAATSVLDSKVALVAAGTPKRRNVGR
RRRDGRMRRRTRADLRRRAQRTLCKTNSPTLQSSKQLEGTLTLDAASVASVPLPVPEATT
MQGGEVVLQADCELEDPAQCASLEPVPCPSPVPALPSVTMPVPTPTPSPSPVSISTSDEP
EVTARLLPEEPAPAVASTSSPSSSSSSSSSSSSSPSSSPSSNSERQGGFTAGLDSSSSSS
SSSTAAATADPLDDGASMVTSVTGGTTTSSRESSPAASPTPIIATSAQATKEQKRRPDEP
QAFSSFPEKRPRMEDRQSFRTTIDGVHTEKPQPTAEEPKVPPIRIQLSRIKPPWVKGPPT
YQICPRIVPPGEGSRRSGTGARTLADIKARAQQARAQREAAAAVAATGDGPGPGGGRAGA
GLQDRSSGRRTREHPGPVEPGGTGDVEEQGSPAGSHPPGTQLQQSKLEPSSTPTPNTAAS
SPSLYTSSNPSLSFSEPPQTPTPSPTTPEERPGELSGEDVTTPPPVKGTSNGLSEKAVLP
EPESVSSHLRGRGEGDDCDRTTAKHGPLAPTSIPDSLPRFGAQGVDVIRSLAGGGGVIQH
GSHHVGPQENPPTPAREGQSEKQSRPPERGRDTASLPRLPPSVREDEAGHHSDSTETASD
CENESQEEEPHLSMWSHRLPAQRNGNIQHLQRLSQQAHGQPVICSPPLQQIQQPVIHAHV
SNHHGHSQTVIQPCFPNGLPSQSLIQPGLKQPQPECTPHPDQQTLAAPHSQTQRGHKTDP
MDDYKASSRGSAEEDCRLGLKPSPIHPTAGSKRLPSSARPVSTVEANNPLVTQLLQGSLP
MEKVLPQTHSSSKLEINRLPGGHQPAPQSQLSRQQQTRNPGLRFRGPTEAHTGESLVPAL
SSQNQQKSPVGRGGSPGASRSFGSSPPGTVPSRMACLLEEASSRATAMQQYLSQQPGGAV
PLGAVPVITSLSSSSSSSRRNSQESAVIGESPERHHNNLAQPRATPDLCTTEVVPTVKIN
WHPSKPHPPHQQQLSPAPSVKSEVTSRPSCQALAKTSPSGPMVGGGPGVVVTKKEAVNSM
DGYLTGGGAMEGLLNMEMSLARMAKKEAQSKAQYSSTSPSSSSSSSSISSLPFQLYGKLP
KQGGGSSVSAPGFSYTANVSVVDGSGFSRSIADGVLQLRQRHSASQSATLSIQAFADSAA
EEVALKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacagaagagaaagaaggaacgcacgtgggctgaggcggctcgcatggtt
ctagagaacttctctgatgcccccatgacgcccaagcagatcctgcatgttatacagacc
aaggggctcaaggaaatgagaagtggcacagcccctctggcctgtctggtgaccatgctg
cactcccaggtgaggggggacagagtaaaaaacagcatcttctttaagcttcctggcagg
atgagtctgtttaccttgaagaagaacgctctgcagtggaccaagagttccacggaggcg
gagacagccgaagccagcacactggctactgctaacgcagcaacagcagggccaacggaa
ggtgcggagcaagagagctgtgactccatggaaatagttgcagccagtggagagaacgat
gcatccatagatgagagctcgtccagtgcctcctgctccacagagccccagaccaggctg
agtagatctggagtctctggacaggtgcgctctgaggcccaggcacagacccgactaagt
cgatccagacagtcgagcagacagaggaagaaggctgtgatgatgccgcgggtggtcctc
actccactcaaggtcaatggtgaacacgtcccatcaggagcagcggggaggcgcagggaa
gactctagggggggtccaggccccacgctccgtgcccgccccgagctggctagctggaaa
cgcccccagcacttcaagagcttgcgtggctaccactcagggcccatgaagaggagccga
ggcggggtggaggtggactttgagacgcccggctctatcctggtcaacaccaacatcagg
gctctcatcaacatgcgcaccttctctgccttcccagcccactcccaacagcaactcctg
cagctcctccccgaggtcgaccgccaggttggacctgatggtctggctcgcctcagtaac
tcagctctcaacaatgaattcttcactcacgcctcccagagctggaaggaaaggcttgct
gagggggagttcacccatgagatgcaagtgcgattccgccaggagatggagaaagagaag
aaagtggaggcatggaaggagaagttctttgaggagtaccatggtcaaaagtctggcctg
acccgagaagagtctctgaagttgacgatgagcgaagcggccgatgctgccaccagcgtt
ctggacagcaaggtggccttggtggcggcgggaacgcccaagcgccgcaatgtgggcagg
cggaggcgcgatggcaggatgagacggcgaacgcgggcagacttgagacgcagggcgcaa
cgcaccctctgtaagaccaactcccctaccctgcagtcctccaagcagctggaaggcacg
ctcactttagatgcagcttctgttgcctctgtccccttgcccgtcccagaggccaccacg
atgcagggaggagaggtggtgttgcaggccgactgtgaactggaggacccggcccagtgt
gcctccctagagcccgtgccctgcccttcccctgtgcctgcgctcccgtctgtgaccatg
cctgtgcccaccccgacccccagtcccagccctgtatccatcagcacctccgatgagcct
gaagtcaccgcccgcctgctccccgaagagcctgcacctgccgtcgcctcaacctcctct
ccctcctcctcgtcttcctcctcctcctcctcgtcctcctccccttcctcatctccctcc
tccaactcagagagacagggggggttcaccgccggcttggattcttcctcctcatcctct
tcttcctccacggccgctgccaccgctgatccactggacgacggggcctccatggtcacc
tcggtcacggggggcacaaccaccagcagccgggagagcagccctgcagccagccccacc
cccatcatcgccacctccgcccaggccaccaaggagcagaagaggaggccagacgagccc
caggccttctccagcttccccgaaaagaggccgcgaatggaagatcgtcagtcctttcgt
accacaatcgacggagttcacacggaaaagccgcagccgacagcagaggagcccaaggtc
ccacctatccggattcaactctccagaatcaaaccgccctgggtcaaagggccgccaacc
taccagatctgtccccgcatcgtgccccccggcgagggctcgcggcgctcggggacgggg
gcgcgcaccctggcggacatcaaagcccgcgcccagcaggcccgggcccagcgcgaggcc
gctgctgctgttgcagccactggggatggaccagggccgggcgggggcagggctggtgct
gggctacaggatcgcagcagtggaagacgaacgcgagagcaccctggacccgtcgagccc
ggaggaacaggagacgtggaggagcagggatcgcctgcgggctctcatccgcctggaaca
caactacagcagtccaaattagagccctcatctacccccacccccaacacagctgcctcg
tccccctccctgtacacctcctccaacccctccctatccttctccgagcccccgcagacc
cccactccatccccaaccaccccagaggagcgaccaggggagctgagtggggaagatgtg
acaacaccaccaccagtcaaaggcacctccaacggactctcggaaaaggcagtgctgccc
gagcctgagtctgtgtccagccacctcagagggcggggcgagggggacgactgtgacagg
acaacggccaaacatggtcccctggctcccacctccatcccagattctctgcccaggttc
ggggcccagggagtggatgtgatcaggtccctggctgggggagggggtgtcatccaacat
ggttcccaccacgtggggccacaagagaacccccccaccccggccagagagggccagagc
gaaaagcagtcacggcccccggagagggggagagatacagcctccctccctcgtctccca
ccttcagtcagagaggacgaagcagggcatcacagcgattccacggagacggcctccgac
tgcgagaacgagagccaggaggaggagccccacctgagcatgtggagccaccgcctgcct
gctcagcgcaacggcaacatccagcacctccaaaggttgtctcagcaggcccacggccag
cctgtgatctgcagcccccctctacagcagatccagcagccggtcatccatgctcacgtg
tccaaccaccacggccacagccaaacagtcatccagccctgcttccccaacggcctgccc
agccagagtctcatacagccaggcctaaagcagccgcagcctgaatgcactccccaccca
gaccaacagactctcgctgcgccacactcccaaacccagagggggcacaaaacggaccca
atggatgactacaaggcgtccagccggggctcggctgaggaggactgtaggctggggctg
aagccttctcccatccaccccaccgctggctccaagaggctccctagttcggcccggcct
gtgtccacagtggaggccaacaatcctctggtcacccagctgcttcaaggcagcctcccg
atggagaaagtcctgccgcagacgcactcgtctagcaagctagagatcaaccgcctgcca
ggggggcaccagccagccccccagtcccagctcagccggcagcaacagaccaggaatccg
gggcttcgcttcaggggccccacagaggcccatacgggagagtccctggtccctgcgttg
tcctctcagaaccagcagaagtcccctgttggccgaggaggctcccctggagcaagccgg
agcttcgggtcctctcccccgggcacagtgccctcccgcatggcctgcctgctggaggag
gcctcctctcgggccacggccatgcagcagtacctgtcccagcagccaggtggcgctgtg
ccccttggggccgtgcctgtcatcacatccctctcttcctcgtcctcttcctccagacgg
aactcccaagagtcggctgtcatcggagagtctccagagaggcaccacaacaaccttgct
cagccccgggccaccccggacctctgcaccactgaggtggtccccactgtcaagataaac
tggcacccttccaaaccccaccccccgcaccaacagcagctctcgcccgcacccagcgtg
aaaagcgaggtcacctcccggccctcttgtcaagctcttgccaaaacctccccctctggc
cccatggtaggtggtgggccaggtgtggtggtcaccaaaaaggaggcagtgaactctatg
gacggttacctgactggaggtggagctatggagggactgctgaacatggagatgtcctta
gcccgcatggctaagaaggaggcgcaaagcaaagctcaatactcttccacctccccctct
tcatcttcatcctcctcttcgatctcctccctccctttccagctctatggtaagctgccc
aagcagggcggaggcagcagtgtgtcggcgcccggcttcagctacacggccaacgtgtct
gtggtagacggcagcggcttctcgaggagcattgccgatggcgtcctacagctgcgtcag
cgccacagtgccagccagagcgccacgctcagcatccaggcgttcgcagacagcgccgct
gaggaggtggccctcaagtgctcctgccgcctcaaggccatgatcatgtgccagggctgc
ggggccttctgccacgacgactgcatcggcccctccaaactgtgtgtatcctgcttggtg
gtcagatag
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