Salvelinus namaycush (lake trout): 120061328
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Entry
120061328 CDS
T07522
Name
(RefSeq) trichohyalin-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120061328
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
Others
120061328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
120061328
NCBI-ProteinID:
XP_038866995
UniProt:
A0A8U1EZS4
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Position
Sna16:complement(32496884..32523038)
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AA seq
832 aa
AA seq
DB search
MTELEIDQSHLPRVQEVCHVFAVLEDGALAHNLQEQEIEKYYTTNMQKNQLVQNDIRIAK
RLQNEEEEQSTQHRALLSQASRQLQEEDSEYARMIQEEILRCADEEAQRREQEDEEMAKR
IQEEEELRVRQRSRQESLSDDSASVPASPSPCPHQPALSTSPIHGEELHHQPATSRWQCS
ISNTQPQSDSTAAPLSEPYRTAGQNNRTLASHDRHMDPPRLIRKYLQIPPPPDYLSDEGS
ENIDTFFPEHLPPSWPCRLEKCLNTATSGYRTPVHQPQDRSSGSLSRHNRFREDHSKVWE
RDRGEREERGSLHDRDSIWDRNPRVVHDGGYDRDPRSDDGRERHYRGRISDPARGVQDRD
RDEVRRSWTHRETSDKKQVRFQDDTSRRCRSYHGDSRRVGNVWELIAHDLRERGVALRQS
FNGGSQGARGKGRDSQVHDGGNTIVCNNSQPQRAFQIAIRNRPSYHGDVRERSASQRESL
CHRGHEGRREKIHENLTIVEGSGTEVYDEHSRDDRLFSREREGSSGDPRHKVSSGGDQER
EEGRGDRHYHNERRVRSESEHQHEEEDKPYHSEEERPPPSQKVSQRSQSFCSRGPSIRAR
SKHTPRAGAALQPEKGACLDLGELQQVLLDEELARRLQEEEKLLRRSPPAHPTHYQRDSY
PAGDFRVAQVAQDEEIACFMQKQEMKSKRRSRDLDGPGSRCEPHDLADPYDRRTARERRI
ERERLDSEDLPSPTEDCSPDYQAPRPTTQPQQPIRNIAEELDPTFKASRQGKESIRAGPT
ISGTSSCQSHPTPHSGLHDFMEEPTFIPPTKRQSDKSVRAKSKEKKENCKQQ
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctggagattgatcagtcccacctgccacgggtccaggaagtgtgccatgtt
tttgctgtcctagaggatggagcgttggcacacaacctacaggaacaggaaattgagaag
tattacactaccaacatgcagaagaaccagctggtgcagaatgacatccgcatcgccaag
aggctgcagaatgaggaggaggaacagagcactcagcacagagccctcctgagccaggca
tctagacaacttcaggaggaggactcggagtacgccaggatgatccaggaggagatcttg
agatgtgctgatgaggaggctcagagaagggagcaggaggacgaggaaatggctaaacga
atccaggaagaggaggagctgagggtcagacagaggagtaggcaggagagcctcagtgac
gacagtgccagcgtccctgcctcaccctcgccttgcccacaccagcctgctctcagcacc
agccccatacatggagaagagctgcaccatcagcctgctaccagcaggtggcagtgttct
atctctaacacacagccacagtcagactctacagctgcgcctctgtctgagccctacagg
acagcaggacagaataatagaactctagcatcacatgatagacacatggatccccctaga
ctcatcagaaaatacctccaaatacctcctccacctgactatctgagtgatgaaggctca
gagaacatagacacttttttccctgaacacctccctccatcctggccgtgtagactggag
aaatgtctcaacactgccactagtggttacaggactcctgtgcaccagccacaagataga
agcagcgggagtctcagccgccacaaccgcttcagagaggaccatagcaaggtttgggag
agggacagaggagagagggaagaaagggggagtctgcatgacagggatagtatttgggac
aggaatcccagggtagtgcatgatgggggttatgacagggaccccaggtcagacgatggc
agagagcggcactacagaggaagaattagtgaccctgccagaggggtgcaggatagagac
cgagatgaggtcagaaggagctggacccacagagagaccagcgacaagaaacaagtccgc
ttccaggacgacaccagcaggcgctgtcgtagttaccatggcgacagcaggcgggtggga
aatgtctgggagctgattgcccatgacttaagagagcggggtgtggccttgaggcaaagc
ttcaacggggggtcacagggggcaaggggtaagggcagagacagccaggtgcatgatggg
ggaaataccatcgtctgtaacaactctcaaccacagagggcttttcaaatagccatccgc
aacaggcccagttaccatggagatgtcagggaaaggagtgcctcacaaagagaaagcctc
tgtcaccgtggccatgaggggaggagagaaaaaatccatgaaaacctgaccatagtggag
ggtagtgggactgaggtctatgatgaacacagtagagatgataggctgttcagcagagag
agagaggggagtagtggagaccccagacacaaggtcagctcaggtggggaccaggagagg
gaggagggcaggggcgacaggcactaccataacgagcgcagggtgaggagtgagagtgaa
caccagcatgaggaggaggataagccgtaccactcggaggaggagagacccccaccctca
cagaaagtctcccagcgcagccaaagcttctgcagcagagggccctccatcagggccaga
tccaagcacacccccagagcaggagccgcactgcagccggagaagggggcgtgtctggac
ctgggggagctgcagcaggtgctgctggatgaggagctggccaggaggctgcaggaggag
gagaagctgctgaggaggagccctccagcccatcccacccactatcaacgtgattcatac
ccagcgggagacttcagagttgcacaagtggctcaggatgaggaaatcgcctgcttcatg
cagaagcaggaaatgaagtcaaagcgtcgttcacgtgaccttgatggcccggggtcacgg
tgtgaaccgcatgacctggctgacccctatgacagaagaactgccagagagagacggatc
gagcgggagagactggactcagaggaccttccatctcctactgaagactgctctccagac
tatcaggcccctagacccacaacccaaccacaacagccaatcagaaacattgcagaggaa
ctggacccaaccttcaaggccagtagacaaggcaaggagagcatcagagcgggaccgaca
atctctggcacatcctcctgccagtctcatcccactcctcactccggcttacatgatttt
atggaggagccaacgttcatcccgcccaccaagaggcaaagcgacaaatctgtacgcgcc
aaatccaaagagaagaaggagaactgtaagcagcagtga
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