Salvelinus namaycush (lake trout): 120061360
Help
Entry
120061360 CDS
T07522
Name
(RefSeq) embryonic polyadenylate-binding protein-like
KO
K13126
polyadenylate-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120061360
09123 Folding, sorting and degradation
03018 RNA degradation
120061360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120061360
03041 Spliceosome [BR:
snh03041
]
120061360
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120061360
mRNA cycle factors
Stress granule specific factors
120061360
Spliceosome [BR:
snh03041
]
Complex C
Other components
Complex C specific factors
120061360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
120061360
NCBI-ProteinID:
XP_038867051
UniProt:
A0A8U1EZU8
LinkDB
All DBs
Position
Sna16:35942329..35947077
Genome browser
AA seq
633 aa
AA seq
DB search
MIFTISVCRMNSTGQSYPLASLYVGDLHPDVTEAMLYQKFSPAGPITSIRVCRDVITRRS
LGYAYINFQQPADAECALDTMNYEVLKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESID
NKALYDTFSTFGNILSCKVVCDENGSKGYGFVHFETQEAANRAIDTINGMLLNDRKVFVG
HFKSHKERQAEFGAKAMKFTNVYIKNFGDDYSDEKLQEVFSAFGRTLSVRVMMDERGRSR
GFGFVNYENHEDAQRAVEEMNGKELVPGRVLYVGRAQKRMERQGELKRKFELIKQERIHR
YQGVNLYVKNLDDGLDDEKLRKEFAPYGTITSAKVMTDGGHSKGFGFVCFSSPEEATKAV
TEMNGRIVATKPLYVALAQRKEERKAILTNKYMQRTMPGPVIDSYQQAGYYMSAVPQPPS
RTFYNPNPVSTMRTSPRWAAQPPRPQTPYSGQFVRSAVPRRASTPISTVRQASTQAPRII
NYTQRMANIGTQTAGGRAGMSGGMVRGTQYKYSSGVRNLQQVITMPAPMAVQQVVTQQIM
EPAVHVRGQEPLTASMLASAPLMEQKQLLGERLYPLIHGFHPNLAGKITGMLLEIDNSEL
LHMLESPESLHSKVDEAVAVLQAHQAKENSPKK
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcactatctctgtctgcaggatgaacagcactggccagtcatacccattggcc
tccctctacgtaggggacctgcatcctgacgtcacagaggccatgctctaccagaagttc
tctcctgctgggcccatcacatccatccgtgtctgccgtgatgtcatcactcgcaggtcc
ctaggatacgcatacatcaacttccaacaacccgctgatgcggaatgtgctctggataca
atgaactatgaggtcctcaagggtaggcctatcagaataatgtggtctcagcgtgaccca
gggctacggaagtcaggagttggaaacatttttatcaagaacatggacgagtccattgac
aacaaggccctgtatgacacattctcaacctttgggaatattctgtcttgcaaggttgtg
tgtgatgagaatggctccaaaggctacggctttgttcactttgaaacccaagaggcagcc
aatcgtgccattgataccattaatggaatgctattgaatgaccggaaagtttttgttggc
cactttaagtcccataaggagcgacaggctgagtttggggccaaagccatgaagttcacc
aatgtgtacatcaagaactttggcgatgactatagtgatgagaaactccaggaggtcttc
tctgcatttggcaggaccctcagtgtgcgggtgatgatggacgaaaggggccggtctcgt
ggatttggctttgtaaactatgaaaaccacgaggatgcacaaagggcagttgaggagatg
aatgggaaagaactcgttcctggccgagttctgtatgtgggccgtgctcagaagaggatg
gagcgacagggggagctgaaacgcaagtttgagctgatcaaacaggaacgtatccaccgc
tatcagggggtcaatttgtacgtcaagaacttggatgatgggttggacgatgagaaactc
aggaaggagtttgccccttatggcaccatcaccagtgccaaggtgatgacggacgggggc
cacagcaagggctttggctttgtctgtttctcgtctcccgaggaggccaccaaagcggta
actgagatgaacggccgcattgtggccacaaagccgctgtacgtggctctggcccagcgc
aaggaggagcggaaggccatcctcaccaacaaatacatgcagaggaccatgcctggccca
gtcatcgactcctaccagcaggcaggctactatatgtctgctgtgcctcagcccccaagt
cgcaccttctacaaccccaaccctgtgagcaccatgaggacatctcctcgctgggctgca
cagccacccagaccacagacaccctactcgggccagtttgtcaggtctgctgttccccga
cgcgcctccacccccatcagcaccgtcagacaggcctccacccaggctccacgcatcatc
aactacacacagaggatggctaacattggcacacagacagcaggaggtcgggcaggcatg
tctggtggtatggtccgaggcacccagtataaatactcatcaggggtgaggaacttacag
caggtcatcactatgcccgcaccaatggcagtgcagcaggttgttacccagcagattatg
gagccagcggtgcatgtcagaggccaggaacccctcactgcctccatgctggcttcagcc
cctctcatggagcagaaacagctgcttggtgagcggttgtaccctctgatccatggcttt
caccccaacctggctggtaaaatcactgggatgctgctggagattgacaactctgagctg
ctgcacatgctggagtcacccgagtccctgcattctaaggtggatgaggcggtagctgtg
ctgcaagcccaccaggccaaggaaaactctcctaagaagtag
DBGET
integrated database retrieval system
