Salvelinus namaycush (lake trout): 120061555
Help
Entry
120061555 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 4-like
KO
K24056
PDZ domain-containing protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120061555
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
120061555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
120061555
NCBI-ProteinID:
XP_038867398
UniProt:
A0A8U1F0D8
LinkDB
All DBs
Position
Sna16:complement(20404693..20423142)
Genome browser
AA seq
858 aa
AA seq
DB search
MGCNMCVVQKPEEQYRVMFQVNGKELSCLSRDPTLDVRDPLLSHVLKRGARRRAGLAGTA
AVPGGLTDCVDSGTQTDISFQHMLTLGRTAHHPGGAPPPHPPPSPPLPPILEPNLLNELX
PEYYDPNDYFDITQHEADLRQDELEYEEVELYKSRQQDKLGLTVCYRTDDEEDLGIYVGE
VNPNSIAAMDGRIREGDRILQINGVDIQNREEAVAILTQEDSTNISLLLARPEIENDNQL
DPDELELEVLDNAVHLPSPHQLWNRASMLGEGPGVVGGGGVVVIRGRGHRDSPGLLHTLL
SNSQELDSGVGRTDESTRNEESSEHDLLGDDQTSAPTTNATNTPGSMRRFHSGQGDRDTP
PLLHGHSTEFHFSTDSLLGLDCLSGGGGGDLAGERVYAADPVMMMMPGLTEEECERYREL
LEIKCYYEKNSNALLLLGEHEGHGEQGGDGGVPLDVNRNESLMQHEMALVEEELRHLEFK
CRNILRAQKMQQLRERCLKAWPLEEESGAGGGAGAGRVAPLVSEESCHHELSDINELPER
ERSDKDSTSAYNTGGESCRSTPLVSEQYPSPSRGGRSERGQANLNQPYSPSSHRRGSEVK
TSSPRGAKFRSLSRDGGARRGSDGGVRCPKTNGTVEGREGRSAENSPYLSRRHSGSRIPQ
RYQSCMQLSLGSTCKDIPQGPVSMPSLPIPPPLPPPASPRMEWKVKVRSDGSRYVAKRPV
RDRLLKARAIKIREERSGMTTDDDAISEMKMGRYWSKEERKQQLLRAREQRRRREFMMQS
RLDCLRERDREYSGGGQQGAPQGQEPTTILELSHRRSQKKRSRRILDNWITIQELLAHGT
RSPDGKKVYNPLLSVTTV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcaacatgtgtgtggttcagaagcctgaggaacagtacagggtcatgttccag
gtgaatggtaaggagctgtcctgtctttcacgggaccccaccctggatgtgcgagaccct
ctgctgtctcacgtgttgaagaggggggcccggcggcgggcgggactggcagggacagca
gcagttccaggggggctgactgactgtgtggacagcggcactcagactgacatcagcttc
caacacatgttgactctgggaaggaccgcccaccacccaggtggagccccgccccctcac
ccgcccccctcccctccactgccacccatcctggaacccaacctgctcaacgagctgtga
cctgaatattatgaccccaatgactactttgacatcactcagcatgaggcggatctcagg
caggatgagttggagtatgaggaggtggagctgtataagtctcgtcagcaggacaagctg
gggttaacggtgtgctaccggacagacgatgaggaggacctggggatctatgtgggcgag
gtcaaccccaatagtatagctgctatggatggccgtatccgagagggggatagaatctta
cagataaacggggtggacatccagaacagagaggaggcggtggccattctgacccaggag
gacagcaccaacatctccctgctcctggcccggcctgaaatagagaatgacaaccagctg
gacccagatgaactggaactggaggttctggataacgctgtccacctgcccagcccccat
cagctgtggaacagggcctccatgctgggtgaaggaccaggggtcgtgggtgggggtggt
gtggtggtaatccgcgggcgaggtcaccgtgactctccaggcctgctccacacgttgctg
agtaacagccaggagttggacagtggggtgggccgtacagacgagagtacccgcaatgag
gagtcctcagaacacgacctactaggagacgaccagaccagcgcccccaccaccaacgcc
accaacacccccggcagcatgcgcaggttccactctggccagggggacagggacacccca
ccccttctacatggccactccacagagttccacttcagcactgactctctactgggtctg
gactgtctgagtgggggaggaggtggtgacctggcaggggagagggtctacgcagctgac
ccagtgatgatgatgatgccgggtctgacagaagaagagtgtgagaggtacagggagctc
ctggagatcaagtgttattatgagaagaacagcaatgctcttctgctgctgggggagcat
gagggtcatggggaacaggggggcgatgggggggttcctctggatgtgaataggaatgag
agcctgatgcagcatgagatggccctcgtggaagaggagctacgccacctggagtttaag
tgtcgtaacatcctgagggcccagaagatgcagcagctccgggagcgctgtctcaaggca
tggcccctggaggaggaaagtggggctggaggtggggccggggctgggcgggtggctcct
ttggttagcgaggagtcctgtcaccatgagctgtcagacattaatgagttgcctgagagg
gagcgctccgacaaggacagcaccagcgcctacaacacaggaggggagagctgcaggagc
acccctctggtcagcgaacagtatccctccccctctaggggaggcaggagtgagaggggg
caggctaacctgaaccagccctactcccctagctcacacaggaggggatcggaagtcaag
acctctagcccgagaggggccaagttcagatccctgtcccgtgacgggggggcaaggagg
gggtcagacggaggggtgagatgccccaaaaccaatggaacagtggaggggagggaaggg
cgtagcgctgagaacagcccttatctgtcccgccgccactctggctccagaatcccccag
cgctaccagagctgcatgcagctgagcctggggagcacatgcaaggacatcccccagggc
cctgtgtccatgccatccttacccatcccccctcccctgcctccgccggcctcaccgcgt
atggagtggaaggtcaaagtacgcagcgacggatcccgctatgttgccaagcggcccgtt
agggaccgcctcctgaaggcccgggccattaagatccgggaggagcgcagcggcatgacc
acggacgacgatgccatcagcgagatgaagatgggccgctattggtccaaggaggaaagg
aagcagcagcttctcagggccagggaacagcgcagacgcagggagtttatgatgcagagc
aggctggactgcctgagggagagggatagggagtacagtggcggtggacaacagggggct
ccgcagggacaggagcccactaccatcttggagctgagccacaggaggagccagaagaaa
cggagccgtaggatcctggacaactggatcaccatccaggaactactggcccacggaacc
aggtcacctgacggcaagaaggtctacaaccctctgctgtcagtcaccactgtctaa
DBGET
integrated database retrieval system
