Salvelinus namaycush (lake trout): 120061581
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Entry
120061581 CDS
T07522
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120061581 (nphp4)
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
120061581 (nphp4)
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Gene cluster
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
120061581
NCBI-ProteinID:
XP_038867417
UniProt:
A0A8U1F0D7
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Position
Sna16:24523267..24661559
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AA seq
1220 aa
AA seq
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MVKSLTCFLDRLSISLHPSLEKFESQLLQHVSMDCHNTKHSGPESSAVVVIQERRLHVGV
HNGWGFLERPQVVVLETTEATDWSRGRTRGGTSRQGTLTRDCSSSPSQSLALRSSLELKL
PSHQAVGIVLQLEYVFSSPLIGDGKLSSTSTISRTAFMQCLRWGMWCPFQEWGALRAEEV
KLSLQGGSTPNPYGVMAYTSSSNSQSPAQVVDERDMVRFRVSSSSVQKASSSTAVSLRRS
RTGQEEMAAQQRKPPSPGRSRRASQASPPGSPQGPGLAATSRYPTMSHSTAVSPWQQPFS
SQLYPSPLASAHQLSHVELPAASNITHLEVDLNVSPRDLLPAYQSATLANEGYLELQELP
FTPIHAPIITMGTHAVPSSSSVSSRSSLAHLYSAGFPYITDPSGLVAEVLDPTEPVNFDP
QREEADPLQGNVLLLQFLAFSRIPQQGGSSNWPDSVHFTFQLYRFPPVTTQCLKLLGIDK
LPKKSSETPPCVLAVINKDGTVNSGSPGLQLQFRVDGAFLQPGERRWFLRYLALHTLQVD
VWDSQSLLLIGSTALGLKHMLRQGRPAVQATHELEVITTEYMGEGVPVSLHRAPNPISVF
TTIKGRLHLRLGNVGCPVDQNKPNKPQCLPPSRSHIISPPDATSGFTGGSLSSKSIQRLN
VRNAARAQRLVELDGDLVPLLQSHMKEGGGTPLTNTPWWGETDDVRQRKLNRMVAVRQHE
GGQDGTGSEVKTKVTGRRAERAQLARDLRLMHAYRERSKAEGITHILSQAITIHHTLYAT
LGTAEYLEYILRNPFNTPQTVTIYSEDPELSVITDCDEWRYFKTLTKTLTPLEEDMFHLK
EGTLAPQVYLRPKESVHVPLKYQTFVSDNSVVPQVPSLIPSGRSTQVAKKHLSNTVLAKS
IKVTFRAEDGKPLAICQVSVEPTPHVIDQTFRFYQPELSFLKKALRLPPWERTPVGDTDA
GFQISVRCSDPNVICETKMLAQGEPQDVYLKVPGSPSPQIRKFFVTVFTDKWLAVPAQVW
QVYVHFLQRVDISCVTGQRTCQSLVIRGTQATRKVQCYTSHPQELKVDPAEVFVLLPGVV
QDLQLCVCPLRAGSRFCYLTVVDVEQHTLVACWLLSLTCRLPILSKAFEMCAPVGGGRGS
TRKITYTNPYPTSRVLLLRSDHPDLLQFKEDRFEIGGGETYRIGLRFAPSQSPGAQEILI
YINNQEETTEETFCVKVKYT
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagagcctcacctgcttcctggacaggctgtccatctctctgcatccctccctg
gagaagtttgagagccagctgctgcagcatgtcagcatggactgccacaacacgaaacac
tcgggtccggagagctcagcggtggtggtcatccaggagcggaggctccacgtgggggtc
cacaacggctggggcttcttggagcgcccccaggtggtggtgctggagacaaccgaggcc
accgattggagcaggggacgtaccagagggggcacatcccgacaaggcacactgaccaga
gactgcagctccagtcctagtcagagcctggctctacgtagcagtctggagctcaagctg
cccagtcaccaggctgtggggatcgtcctccagcttgagtatgtcttctcctcgccgctc
atcggtgacggaaagctctcctcgacctccacaatctcccggacagccttcatgcagtgc
ctgcgctgggggatgtggtgccccttccaggagtggggtgccctgagggccgaagaagtg
aagcttagtctgcagggcggctctacgcccaacccctatggagtcatggcctatacctct
tcctccaacagccaaagtcctgcccaggtggtcgatgagagggacatggtcaggttccgt
gtgtcttccagctcagtgcagaaggcctcgtccagcacagccgtgtctctgaggaggagc
aggacaggacaggaggaaatggcagcacagcagaggaaacctccctcaccaggtcgaagt
cggcgtgcctctcaagcatctcctccgggatcaccacaaggcccagggctggcagctact
tcacgctacccgaccatgagccactccactgccgtgtcgccatggcaacagccgttttcc
tctcagctctatccttccccattggcatcggcccaccagctgtcacatgtcgagctccca
gctgccagcaacatcacccaccttgaggtggacctaaacgtgtcccctagggacctcctc
cctgcataccaatctgccacgctggccaacgagggctacctggagctccaagagctgcca
ttcacccccatccatgcccccatcatcaccatgggaacacatgctgtgcccagctcttcc
tctgtgagttccaggagctccctggcccacctctactcagccggcttcccctacatcaca
gaccccagtgggctggtggctgaagtgctggacccgacagaaccagtcaactttgacccc
cagagagaggaggcggatcccctgcagggcaatgtgctcctgctgcagtttctggcattt
tccaggataccacagcaaggggggagcagcaactggccagactctgttcattttaccttc
cagctctaccgcttcccaccagtgaccacacagtgcctgaaactactgggcatcgacaag
ctgccgaagaaatccagcgagacgcctccctgtgtcctggccgtcattaacaaggatgga
acagtcaactctggctccccggggctccagctgcagtttcgtgtggacggggcattcttg
cagccgggtgagagacgctggttcctgcgctacctggccctgcacactctgcaggtggat
gtgtgggacagccaatccctcctgcttatcggctccacagccctggggctcaagcatatg
ttgcggcagggccgtccagctgtacaggccactcatgagctggaggtcatcaccacagag
tacatgggtgaaggcgtgccggtgagcctgcaccgggcccccaacccgatcagcgtcttc
accaccatcaaaggtcggctccatctgcgcctgggcaacgtgggatgtcctgtagaccag
aacaaacccaacaagccccagtgtcttcctccgtcacgctcccacatcatctcaccgccg
gatgccacaagtggcttcaccgggggcagcttgtcttccaagagcatccaacgactcaac
gtgcgtaacgcggcgcgggcccagaggctggtggagctggacggggacctggtgccgttg
ctccagagccatatgaaggagggcggtgggacgcccctcactaacaccccctggtggggc
gagacagacgacgtacgccagcgcaaactcaatcgcatggtggccgtgcggcagcacgag
gggggacaagatggcaccggcagcgaggtcaagacgaaggtcacgggccgccgagcagag
cgtgcccagttggcgcgggacctgcgcctgatgcatgcctacagggaacgcagtaaggca
gaagggatcacccacatactgagccaggccatcaccatacaccacaccctctacgccacg
ctgggcaccgccgagtacctggagtacatcctccgcaaccccttcaacaccccacagacc
gtcaccatctatagcgaagaccccgagctcagtgtcataacggactgtgacgagtggagg
tatttcaagacactgaccaaaaccttaacccccctggaggaggacatgttccacctcaaa
gagggcacgcttgccccccaggtgtacctgcggcccaaggagagtgtgcacgtccccctc
aaataccagaccttcgtctcagacaactctgtggttccccaggtgccgagtctcataccc
agtggcagaagtactcaggtggccaagaaacatctgtccaatactgtgctggccaagtca
atcaaggtgacattcagggcagaggatggtaagccgctggccatctgccaggtgagcgtg
gagcccacgccgcacgtcattgaccagacattccgcttctaccagccagagttgtccttt
ctgaagaaggccctgcgcctgcccccctgggagagaacgccagttggagacacagatgct
gggtttcagatctcagtgcgctgcagtgaccccaacgtcatctgtgaaacaaagatgttg
gcacaaggggagcctcaagatgtgtatttaaaagtgccgggcagtccgagcccgcaaatc
cgaaagttcttcgtcacagtgttcactgataagtggctagcggtgcccgcccaagtctgg
caagtatatgtgcacttcctgcaacgggtggatatcagctgtgtgactggccagcggacc
tgtcaatcactggtgatacggggcacccaagccacccggaaggtccagtgttacacctcg
cacccacaggagctcaaggtggacccagcggaggtgtttgtcctcctcccgggtgtggta
caggacctgcagttgtgtgtgtgtccgttgcgggcgggcagccgcttctgctacctcacc
gtggtggatgtggagcaacacacgctggtggcctgctggctcctcagcctcacctgtcgc
ctgcccatcctctccaaggcttttgaaatgtgtgcacctgtgggagggggtcgggggagc
acccggaagatcacttacaccaacccctaccccaccagccgtgtcctcctgctacggtca
gaccaccctgacctgctccagtttaaagaggaccgttttgagattgggggaggggagacc
taccgcatcgggctgcgtttcgctcccagccaaagtcctggtgctcaggagatcctcatc
tacatcaacaaccaggaggagaccacggaggagaccttctgtgtgaaggtgaaatacacc
tga
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